Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03302 ATGGGCAAAGCCTCTAGTTCTTCCTCCTCTTCAATCACCAGCTGCAGGAACAACCCTTCCAATTCAACTGCATCCTCTCTCACACACCAACATAGTCAAGACCTTCGCACAGATCTTAGGCTTGGACTCAGCATTTCCGCCACTCAACATGTTGGCTCTTCCAGTTCAGGGGGGGCCTGGCAACCGATGCTGCCACATCTAAGTAGTTTTTCACAAGCTACTGAAGTGAATGATTGCAGCGATCATACCAGCTTCTTTGTGAAGGTGTACATGGAAGGCATTCCAATTGGTAGAAAACTCAATTTGTTAGCTCATGATGGCTATCACGAGTTAGTAAAGACCCTCGAACAAATGTTTGACACTACCATTCTGTGGGGGACTGAGATGGATGGAGTGCAACAAGAGAGATGCCATGTTCTAACTTATGAAGATGGAGAAGGAGATTTGATTATGGTTGGGGACGTTCCTTGGGAGATGTTCCTTTCAGCTGTAAAAAGGTTGAAGATCACAAGGGTTGAGACATTTGGGTGA 531 0.4576 MGKASSSSSSSITSCRNNPSNSTASSLTHQHSQDLRTDLRLGLSISATQHVGSSSSGGAWQPMLPHLSSFSQATEVNDCSDHTSFFVKVYMEGIPIGRKLNLLAHDGYHELVKTLEQMFDTTILWGTEMDGVQQERCHVLTYEDGEGDLIMVGDVPWEMFLSAVKRLKITRVETFG* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03302 176 SUPERFAMILY CAD & PB1 domains 80 170 - -
Phac7g03302 176 MobiDBLite consensus disorder prediction 1 31 - -
Phac7g03302 176 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 36 172 IPR003311 GO:0005634|GO:0006355
Phac7g03302 176 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Phac7g03302 176 Pfam AUX/IAA family 74 171 IPR033389 -
Phac7g03302 176 ProSiteProfiles PB1 domain profile. 84 174 IPR000270 GO:0005515
Phac7g03302 176 Gene3D - 78 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03302 Phac-Chr7 35317381 35320058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03302 88 169 B3 DNA Binding Superfamily AT4G23980 38.554 1.83e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac7g03302 AUX_IAA 1.6e-28 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03302 K14484 - gmx:100781660 323.168