Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03291 ATGAGTAGAAGCTCCTCCTATCTAGATTCCATTGCAAGGTTGAGTTCACTGTGCTCTCTCATGGACTTTCCGGTTCAAAGGGATTCTGCTTTGGACAATTTACAACCAAGTTCTCATCAAAGTAGTGAGTTTGCAAAGGCTGCTTCTAGCACCAAAGGTCCTGATGAGCATTCCTCAGTGATAAACTCGTCATATGGATCAAAAGGAAGCCAAAACCTTTTGATTTCTGATGCATCTAACCTTGTTCCTGATGAGCAATCTCCAGCTGCTGGTCATAATAGTGCTCTCAGTATTCTCGGATCTCGGGGTCACCATCGTAACCAAACCTCAATCTCAGTAGGACTTGAAGCAAAGGGAAAAGCTGATACTAAGTACAGTGATGGAGCCTTGTTAGAATCTTCTTCCCTATGCTCCCTTGCAGCCTCAAATAACAGAAATGTCTGTAGTAGGAAACATGATGGCATTGATTACTCAAAGCATTTAAGTTATAATGGCAAAGAAGCAGAAGATGTAGTGAAGGAAAAGCCTGCTCGGGAAGGCACCGGAGTGAAGAGAAGTAGGAATTCAGAAGTTCATAATTTGTGTGAAAGGGTGAGGGAGGGACATAAACGAAGAGATAAGATCAACAAGAGGATGCGTATATTGAAGGAGCTCATACCCAACTGCAACAAGACGGACAAAGCTTCAATGCTTGATGATGCCATTGAATATCTTAAGACCCTCAAGCTTCAGTTAGAGATTATGTCAATGGGTGGTGGATTTTGTATGCCTTTGATGATGTTACCTAATGCATCTCATCTTATGATCAACGCACCCCATTTGCACCAGTTAATGGGAGTTGGAATGGGGTTAAGGCCAGGGACAACCATCCCTATGACACCTTTGCCTGCAATCACTGACAGCAGAGCTCAAATGTTTCATTTCCCTAACCAAGTGCCCACCATGCACACTTCTCATGCACCTTTCATTCCAATGGTTGGAAATCCTTCTACACAAACCCCTCTTGCAACTGGCACAGCTACCAACATGGCTGAAAACCCTTCCCAGTTAGCCACTCTATTGGCCTCACTCTCCAAGAACTCATCTCTTAATGGAGAAGCTGAACATTCAACAAAACAACCATTGAATCAGGTTTCCCCTCACCACTAG 1149 0.4369 MSRSSSYLDSIARLSSLCSLMDFPVQRDSALDNLQPSSHQSSEFAKAASSTKGPDEHSSVINSSYGSKGSQNLLISDASNLVPDEQSPAAGHNSALSILGSRGHHRNQTSISVGLEAKGKADTKYSDGALLESSSLCSLAASNNRNVCSRKHDGIDYSKHLSYNGKEAEDVVKEKPAREGTGVKRSRNSEVHNLCERVREGHKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLKLQLEIMSMGGGFCMPLMMLPNASHLMINAPHLHQLMGVGMGLRPGTTIPMTPLPAITDSRAQMFHFPNQVPTMHTSHAPFIPMVGNPSTQTPLATGTATNMAENPSQLATLLASLSKNSSLNGEAEHSTKQPLNQVSPHH* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03291 382 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 192 241 IPR011598 GO:0046983
Phac7g03291 382 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 191 261 IPR036638 GO:0046983
Phac7g03291 382 MobiDBLite consensus disorder prediction 361 382 - -
Phac7g03291 382 PANTHER TRANSCRIPTION FACTOR PIF3 35 376 IPR044273 GO:0003700|GO:0006355
Phac7g03291 382 CDD bHLH_AtPIF_like 187 254 IPR047265 -
Phac7g03291 382 MobiDBLite consensus disorder prediction 82 103 - -
Phac7g03291 382 Pfam Helix-loop-helix DNA-binding domain 203 241 IPR011598 GO:0046983
Phac7g03291 382 MobiDBLite consensus disorder prediction 31 65 - -
Phac7g03291 382 Gene3D - 183 249 IPR036638 GO:0046983
Phac7g03291 382 SMART finulus 193 247 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03291 Phac-Chr7 35284847 35287017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03291 150 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 54.545 3.24e-31 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g03291 HLH 3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03291 K12126 - gmx:100818543 455.677