Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03262 ATGGGTATTAAGGGTTTAACTAAGCTTTTGTCGGATAATGCCCCAAAGTCCATGAAGGAGAACAAATTCGAGAGCTACTTCGGTCGCAAGATCGCTGTTGACGCCAGCATGAGCATTTATCAGTTCCTTATTGTCGTTGGAAGAAGCGGAACCGAAATGCTCACTAATGAAGCCGGTGAAGTTACCAGTCATTTACAAGGGATGTTATCGCGGACAATTAGACTTCTTGAAGCCGGGATGAAGCCAGTTTATGTTTTTGATGGGAAGCCACCAGATTTGAAGAAACAAGAGTTGGCAAAACGTTACTCGAAGAGGGCCGAGGCTACTGAGGATTTATCCGAAGCCTTAGAGAGTGCCAATAAAGAAGACATTGAGAAATTCAGTAAACGGACGGTGAAGGTGACAAAGAAGCATAATGAAGACTGCAAAACACTTTTAAGACTTATGGGAGTTCCCGTTGTTGAGGTTTATGCTGTGGCTTCTGAAGATATGGATTCCTTAACATTTGGAGCTCCTAAATTTCTTCGCCACCTAATGGATCCAAGCTCCAAAAAAATTCCAGTCATGGAATTTGAAATTGCAAAGATTTTGGAGGGGCTAAATCTGACCATGGACCAATTTATTGACTTATGCATTCTTTCTGGCTGTGATTATTGTGAAAGTATTCGAGGAATTGGGGGACAGACAGCTTTGAAACTCATACGAGAACATGGCTCTATCGAAAATATACTGGAAAACATAAACAAAGAGAGGTACACAATACCAGATAATTGGCCATATCAAGAGGCTCGACAGCTTTTTAAAGAACCAATGGTTTTAACTGATGAAAAGGAACTTGATATTAAGTGGACTGCTCCAGATGAAGAAGGGTTAATAACATTTCTGGTAAATGAGAATGGCTTCAACAGTGATAGAGTGACTAAGTCGATAGAAAAGATTAAAGCAGCAAAGAACAAATCATCACAAGGCCGATTGGAATCATTTTTTAAGCCAACAGCAAATCCATCTGTACCAATCAAACGCAAGGTATGTATTCATTATGTCTATCATCTCCCAAGATGTGGACATCCAGAATAA 1077 0.402 MGIKGLTKLLSDNAPKSMKENKFESYFGRKIAVDASMSIYQFLIVVGRSGTEMLTNEAGEVTSHLQGMLSRTIRLLEAGMKPVYVFDGKPPDLKKQELAKRYSKRAEATEDLSEALESANKEDIEKFSKRTVKVTKKHNEDCKTLLRLMGVPVVEVYAVASEDMDSLTFGAPKFLRHLMDPSSKKIPVMEFEIAKILEGLNLTMDQFIDLCILSGCDYCESIRGIGGQTALKLIREHGSIENILENINKERYTIPDNWPYQEARQLFKEPMVLTDEKELDIKWTAPDEEGLITFLVNENGFNSDRVTKSIEKIKAAKNKSSQGRLESFFKPTANPSVPIKRKVCIHYVYHLPRCGHPE* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03262 358 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 28 42 IPR006084 -
Phac7g03262 358 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 82 101 IPR006084 -
Phac7g03262 358 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 207 222 IPR006084 -
Phac7g03262 358 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 150 170 IPR006084 -
Phac7g03262 358 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 202 337 IPR036279 -
Phac7g03262 358 Gene3D - 2 201 - -
Phac7g03262 358 Gene3D - 202 269 - -
Phac7g03262 358 CDD PIN_FEN1 4 315 - -
Phac7g03262 358 CDD H3TH_FEN1-Euk 205 273 - -
Phac7g03262 358 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 343 IPR006084 -
Phac7g03262 358 SMART xpgineu 147 202 IPR006086 GO:0004518
Phac7g03262 358 SMART 53exo3 29 289 IPR002421 GO:0003677
Phac7g03262 358 SMART HhH_4 204 237 IPR008918 GO:0003677|GO:0003824
Phac7g03262 358 Coils Coil 99 119 - -
Phac7g03262 358 FunFam Flap endonuclease 1 1 201 - -
Phac7g03262 358 Pfam XPG I-region 156 217 IPR006086 GO:0004518
Phac7g03262 358 Pfam XPG N-terminal domain 1 108 IPR006085 GO:0004518
Phac7g03262 358 SMART xpgn3 1 108 IPR006085 GO:0004518
Phac7g03262 358 Hamap Flap endonuclease 1 [fen]. 1 330 IPR023426 GO:0016788
Phac7g03262 358 FunFam Flap endonuclease 1 202 269 - -
Phac7g03262 358 SUPERFAMILY PIN domain-like 2 217 IPR029060 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03262 1 342 Core DNA Replication Machinery Family AT5G26680 81.616 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03262 K04799 - gmx:100792878 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03262 7 35122609 35127945 Phac7g03262 7 35122609 35127945 ECH