Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03256 ATGCCTCTGTATGAGTTATACCGTCTGGCTAGAGAGAAGCTTGGTACAGAGAATAACGGCACACGTGCATCTGATCAATGTTCCTCACCTGAGAATGATTTTTTTGAGCTAGTTTGGGAGAATGGTCAGATTTCGAGCCAGGGTCAGTCTAGTAGAGTTAGAAGGAGCCCATCTTGCAGAAGTTTGCCATCTCACTGCTTGCCATCACACAGTCCAAAGGGTAGAGACAAAGATGTAGGATGTGGTGCCAGCAAGATGGGAAAATTTAGAGATTTAGACTCTGGATTTAGTGAAATTTCAATGTCGGTGCCGTCCCGTGAAATTGATTTCTGTCAAGACGAAGATGTGTTACCTTGGTTTGATTACGCAGCAATGGATGGTTCTTTGCAACATGACTATGGTTCTGATTTCCTCCCTACCTCAACTAGTTTTACTCTATTGGATAAAAAAAGTCATACCAATATGGCTTTGAGGGAGTCTCATAAAACTTCTGAAGAACATGGGAGTGTTTTCAAGGGTTCTTCAGCTGAACAGGTTGAGAATACCGGACCCAAATCTAGCACAAGTCAGTTATACCCTCCATCATTGCATCATTGTCAAACATCTTTTGTATCTTCAAGATCCAGAGCGTCAGACATAACTGAAAATAACAATACTAGTAATGCAAACCAGGATGCCACTTATGGCGAAATTACCAATTTTCTATCTTCCTCAAGTGATTTTTCTAGCCCAAAGGGGAAGAAGCAAGAGCCACCTCTGCCTGGCAATGGTTCCAGTTCCACCATAATGAATTTCTCCCATTTCGCTAGGCCTGCTGCAATGGTAAGAGCTAATCTTCAGAACATTGGCTTGAAATCTGGTTTGTCTTCAGCAAGACCAGACAGTATGGAAATTAAGAATAACGGTGCAGCTGCAGCTAGCAGCAATCCTCCTGAATCAATTGTTATTGATTCAAGTGGTGAATGTTCGAAGGAACTGACCATGCACTGTCAGCAGGTTGTGGATCAATCTAGGTCCAGGACCGATTTGAACACTTCGCTGTCGAAAGCTGTTGAACAGAATGCAGTACTTTCTAAGCAGTCAGAGCCTGCTTGTAATGAGAGTTCCACTAAGATTGACCAAATTGCCGATCAAGTTCTTGGTGACAATGGTGCTAAAGGGCAGACAACTACTGAAAAAAGTATGGAGGCAGCAGTAGCCTCTTCCTCTGTTTGCTCTGGCAACGGTGCAGACAGAGGTTCAGATGAGCCAAATCAAAATTTGAAACGCAAAAAAAAAGACACCGATGACTCTGAGTGCCATAGTGAAGATGCTGAAGAAGAATCAGCGGGTGTTAAAAAGACAGCTGGAGGGCGTGGAGGTGCAGGTTCCAAGAGAACCCGTGCAGCTGAAGTGCATAATCTATCTGAAAGGAGGCGAAGAGACAGAATCAACGAGAAGATGCGTGCGTTGCAAGAACTCATTCCAAATTGCAATAAGGTGGATAAAGCCTCAATGCTGGACGAGGCAATTGAGTATCTTAAAACACTTCAGCTCCAAGTTCAAATTATGTCAATGGGAGCTGGTTTATATATGCCTCCAATGATGTTACCTGCAGGAATGCAGCACATGCATGCACCACATATGGCTCCATTTTCACCTGTGGGTGTTGGCATGCATATGGGATATGGTATGGGTTATGGAGTGGGAATGCCTGACATGAATGGTGGATCTTTAAGATTCCCTATGATTCAGGTGCCCCAGATGCAAGGAAGTCATATCCCTCTTGCCCATATGTCTGGACCTACTGCTTTACATGAGATGGCCAGATCAAATCTTCCAGGGCTTGGGCTTCCTGGACAAGGACATCCCATGCCAATGCCGCGAGCCCCCACGTTGCCTTTTTCAGGAGGACCTATCATGAATTCACCAGCTCTGGGGCTACATGCCTGTGGATCATCAGGACTTGTTGAAACCGTGGATTCAGCTTCTGCATCTGGCTTAAAGGATCAAATGCCAAATGTTGGCCCAGTACTTAAGCAAAGCACTGGTGGCCGCGACTCAGCAAGTCAGATGCCTACACATGTATGTTTACGGACAGATTTCTAG 2088 0.4483 MPLYELYRLAREKLGTENNGTRASDQCSSPENDFFELVWENGQISSQGQSSRVRRSPSCRSLPSHCLPSHSPKGRDKDVGCGASKMGKFRDLDSGFSEISMSVPSREIDFCQDEDVLPWFDYAAMDGSLQHDYGSDFLPTSTSFTLLDKKSHTNMALRESHKTSEEHGSVFKGSSAEQVENTGPKSSTSQLYPPSLHHCQTSFVSSRSRASDITENNNTSNANQDATYGEITNFLSSSSDFSSPKGKKQEPPLPGNGSSSTIMNFSHFARPAAMVRANLQNIGLKSGLSSARPDSMEIKNNGAAAASSNPPESIVIDSSGECSKELTMHCQQVVDQSRSRTDLNTSLSKAVEQNAVLSKQSEPACNESSTKIDQIADQVLGDNGAKGQTTTEKSMEAAVASSSVCSGNGADRGSDEPNQNLKRKKKDTDDSECHSEDAEEESAGVKKTAGGRGGAGSKRTRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPAGMQHMHAPHMAPFSPVGVGMHMGYGMGYGVGMPDMNGGSLRFPMIQVPQMQGSHIPLAHMSGPTALHEMARSNLPGLGLPGQGHPMPMPRAPTLPFSGGPIMNSPALGLHACGSSGLVETVDSASASGLKDQMPNVGPVLKQSTGGRDSASQMPTHVCLRTDF* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03256 695 MobiDBLite consensus disorder prediction 383 466 - -
Phac7g03256 695 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 458 521 IPR036638 GO:0046983
Phac7g03256 695 FunFam Basic helix-loop-helix transcription factor 456 519 - -
Phac7g03256 695 Pfam Helix-loop-helix DNA-binding domain 465 511 IPR011598 GO:0046983
Phac7g03256 695 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 461 510 IPR011598 GO:0046983
Phac7g03256 695 SMART finulus 467 516 IPR011598 GO:0046983
Phac7g03256 695 CDD bHLH_AtPIF_like 461 523 IPR047265 -
Phac7g03256 695 MobiDBLite consensus disorder prediction 155 262 - -
Phac7g03256 695 MobiDBLite consensus disorder prediction 169 245 - -
Phac7g03256 695 MobiDBLite consensus disorder prediction 383 415 - -
Phac7g03256 695 Gene3D - 456 519 IPR036638 GO:0046983
Phac7g03256 695 MobiDBLite consensus disorder prediction 416 446 - -
Phac7g03256 695 PANTHER TRANSCRIPTION FACTOR PIF3 1 685 IPR044273 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03256 Phac-Chr7 35020811 35026008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03256 1 583 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 36.256 8.21e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g03256 HLH 7.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03256 K12126 - gmx:100794974 1080.86