Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03175 ATGGAGAAGAAAGAGGAGATAACGCTTCCATTGCCATTCCAGACCCATCTCAAGGGCCTTCTTAATGTTTCCTCCACTGCAAGCTCTGCTGGGTCCCACAAACAACACTGTTCTCCGGCTGATGACTCCGACAGCTTCTATGATAAACTCTTTGACTTGTTGGACTCTTCTGGGCTCACTCTCATTTTCAATGTCCGAGAAACATTGCTGGACTTGTACCTGTTTTACCTGGAGGTGACAAGAAGAGGAGGATATCACCAGGTTGGTCGAGAAAAGAAGTGGGGTGAAGTTGTCATAGCCCTGAAATTGGAAGGGAACAGTGTGCAGTTATGTGCTCAAGTTGAAAGGCTTTACTCACATCTTCTCTACCAGTTTGAGCAATTGTACTTCTACAGAAGTCCTGCAAAGCAAGGTCCCATATCTATCAGCAACGAAGAAGGTCCACTTAGGAAGAAGAGGATCTCAACTGCAAGTTTGCCTCATACAATGGATGGTAAAGATGGTCAGAAGAAGGCCACGGAAATGTCCAAGCAATACTCTTGCCACATGACAGGGCCTGGATATGTGCAACAGCCTGTGTTTTTACCAACACCTTCCAAAGAAAAAAAGAAACGCCGAGGTGCCCCTGCGGGACGAAAGACTGCATATCAGATATTCCTCAAGCATGAATGTGCACGGTTGAAAACTTGTAATCAGGCCTTAGATGGAAAAATACTAAGTATGGCTATTCATTCATGGAGGACTATGTCTGATATTGCGAAACAGCCATATGTGGAGGAAAGCAAGAAGAACAAACAAGAAATCAAGGAAGCAATGGTTAGTCACAGTAAACAGCAGAAAACCGAAGATACCAGGGAAGAGAAGTGGTCTAGTATGTGTGGTGATTACCATGTAACTTTGCATCCTGAGGCAGATGACTGTTAG 924 0.4459 MEKKEEITLPLPFQTHLKGLLNVSSTASSAGSHKQHCSPADDSDSFYDKLFDLLDSSGLTLIFNVRETLLDLYLFYLEVTRRGGYHQVGREKKWGEVVIALKLEGNSVQLCAQVERLYSHLLYQFEQLYFYRSPAKQGPISISNEEGPLRKKRISTASLPHTMDGKDGQKKATEMSKQYSCHMTGPGYVQQPVFLPTPSKEKKKRRGAPAGRKTAYQIFLKHECARLKTCNQALDGKILSMAIHSWRTMSDIAKQPYVEESKKNKQEIKEAMVSHSKQQKTEDTREEKWSSMCGDYHVTLHPEADDC* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03175 307 Coils Coil 258 278 - -
Phac7g03175 307 Gene3D - 25 146 IPR036431 GO:0003677
Phac7g03175 307 Pfam ARID/BRIGHT DNA binding domain 43 126 IPR001606 GO:0003677
Phac7g03175 307 SMART ARID_2 37 126 - -
Phac7g03175 307 SUPERFAMILY HMG-box 192 273 IPR036910 -
Phac7g03175 307 MobiDBLite consensus disorder prediction 263 288 - -
Phac7g03175 307 Pfam HMG-box domain 209 275 IPR009071 -
Phac7g03175 307 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 40 285 - -
Phac7g03175 307 ProSiteProfiles ARID domain profile. 40 130 IPR001606 GO:0003677
Phac7g03175 307 CDD HMG-box_SF 213 267 - -
Phac7g03175 307 MobiDBLite consensus disorder prediction 192 211 - -
Phac7g03175 307 Gene3D High mobility group box domain 197 275 IPR036910 -
Phac7g03175 307 SUPERFAMILY ARID-like 39 134 IPR036431 GO:0003677
Phac7g03175 307 SMART bright_3 41 131 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03175 Phac-Chr7 34684244 34686919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03175 42 275 ARID Transcription Factor Family AT3G13350 23.106 3.71e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Phac7g03175 ARID 1.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03175 - - pvu:PHAVU_007G202100g 593.964