Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03174 ATGGAGAAGAAAGAGGAGATAACGCTTCCATTGCCATTCCAGACCCATCTCAAGGGCCTTCTTAATGTTTCCTCCACTGCAAGCTCTGCTGGGTCCCACAAACAACACTGTTCTCCGGCTGATGACTCCGACAGCTTCTATGATAAACTCTTTGACTTGTTGGACTCTTCTGGGCTCACTCTCATTTTCAATGTCCGAGAAACATTGCTGGACTTGTACCTGTTTTACCTGGAGGTGACAAGAAGAGGAGGATATCACCAGGTTGGTCGAGAAAAGAAGTGGGGTGAAGTTGTCATAGCCCTGAAATTGGAAGGGAACAGTGTGCAGTTATGTGCTCAAGTTGAAAGGCTTTACTCACATCTTCTCTACCAGTTTGAGCAATTGTACTTCTACAGAAGTCCTGCAAAGCAAGGTCCCATATCTATCAGCAACGAAGAAGGTCCACTTAGGAAGAAGAGGATCTCAACTGCAAGTTTGCCTCATACAATGGATGGTAAAGATGGTCAGAAGAAGGCCACGGAAATGTCCAAGCAATACTCTTGCCACATGACAGGGCCTGGATATGTGCAACAGCCTGTGTTTTTACCAACACCTTCCAAAGAAAAAAAGAAACGCCGAGGTGCCCCTGCGGGACGAAAGACTGCATATCAGATATTCCTCAAGCATGAATGTGCACGGTTGAAAACTTGTAATCAGGCCTTAGATGGAAAAATACTAAGTATGGCTATTCATTCATGGAGGACTATGTCTGATATTGCGAAACAGGTATATAGAAGTTGGCATAGTATCTATTCTTGA 798 0.4449 MEKKEEITLPLPFQTHLKGLLNVSSTASSAGSHKQHCSPADDSDSFYDKLFDLLDSSGLTLIFNVRETLLDLYLFYLEVTRRGGYHQVGREKKWGEVVIALKLEGNSVQLCAQVERLYSHLLYQFEQLYFYRSPAKQGPISISNEEGPLRKKRISTASLPHTMDGKDGQKKATEMSKQYSCHMTGPGYVQQPVFLPTPSKEKKKRRGAPAGRKTAYQIFLKHECARLKTCNQALDGKILSMAIHSWRTMSDIAKQVYRSWHSIYS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03174 265 ProSiteProfiles ARID domain profile. 40 130 IPR001606 GO:0003677
Phac7g03174 265 Gene3D High mobility group box domain 197 261 IPR036910 -
Phac7g03174 265 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 39 258 - -
Phac7g03174 265 SMART ARID_2 37 126 - -
Phac7g03174 265 Pfam ARID/BRIGHT DNA binding domain 43 126 IPR001606 GO:0003677
Phac7g03174 265 SMART bright_3 41 131 IPR001606 GO:0003677
Phac7g03174 265 SUPERFAMILY HMG-box 192 258 IPR036910 -
Phac7g03174 265 Gene3D - 25 146 IPR036431 GO:0003677
Phac7g03174 265 SUPERFAMILY ARID-like 39 135 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03174 Phac-Chr7 34684244 34686919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03174 42 258 ARID Transcription Factor Family AT3G13350 24.291 1.48e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Phac7g03174 ARID 1.4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03174 - - pvu:PHAVU_007G202100g 488.804