Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03173 ATGCAAAGAAAGTTCACTCTTTTTTTAGTGGGTGCTTCCTGTTTTCCAAGTTTGAGCTGTCTCTTTTTCATGATTGTTATCATGAACAAGAACAATCACCACCTTACTAACTCAAACTTATTATCTGTTTTGTCTCAATCAAGTTTCAATGTCCGAGAAACATTGCTGGACTTGTACCTGTTTTACCTGGAGGTGACAAGAAGAGGAGGATATCACCAGGTTGGTCGAGAAAAGAAGTGGGGTGAAGTTGTCATAGCCCTGAAATTGGAAGGGAACAGTGTGCAGTTATGTGCTCAAGTTGAAAGGCTTTACTCACATCTTCTCTACCAGTTTGAGCAATTGTACTTCTACAGAAGTCCTGCAAAGCAAGGTCCCATATCTATCAGCAACGAAGAAGGTCCACTTAGGAAGAAGAGGATCTCAACTGCAAGTTTGCCTCATACAATGGATGGTAAAGATGGTCAGAAGAAGGCCACGGAAATGTCCAAGCAATACTCTTGCCACATGACAGGGCCTGGATATGTGCAACAGCCTGTGTTTTTACCAACACCTTCCAAAGAAAAAAAGAAACGCCGAGGTGCCCCTGCGGGACGAAAGACTGCATATCAGATATTCCTCAAGCATGAATGTGCACGGTTGAAAACTTGTAATCAGGCCTTAGATGGAAAAATACTAAGTATGGCTATTCATTCATGGAGGACTATGTCTGATATTGCGAAACAGCCATATGTGGAGGAAAGCAAGAAGAACAAACAAGAAATCAAGGAAGCAATGGTTAGTCACAGTAAACAGCAGAAAACCGAAGATACCAGGGAAGAGAAGTGGTCTAGTATGTGTGGTGATTACCATGTAACTTTGCATCCTGAGGCAGATGACTGTTAG 882 0.4218 MQRKFTLFLVGASCFPSLSCLFFMIVIMNKNNHHLTNSNLLSVLSQSSFNVRETLLDLYLFYLEVTRRGGYHQVGREKKWGEVVIALKLEGNSVQLCAQVERLYSHLLYQFEQLYFYRSPAKQGPISISNEEGPLRKKRISTASLPHTMDGKDGQKKATEMSKQYSCHMTGPGYVQQPVFLPTPSKEKKKRRGAPAGRKTAYQIFLKHECARLKTCNQALDGKILSMAIHSWRTMSDIAKQPYVEESKKNKQEIKEAMVSHSKQQKTEDTREEKWSSMCGDYHVTLHPEADDC* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03173 293 Gene3D - 27 127 IPR036431 GO:0003677
Phac7g03173 293 CDD HMG-box_SF 199 253 - -
Phac7g03173 293 MobiDBLite consensus disorder prediction 178 197 - -
Phac7g03173 293 SUPERFAMILY ARID-like 53 120 IPR036431 GO:0003677
Phac7g03173 293 SMART bright_3 30 117 IPR001606 GO:0003677
Phac7g03173 293 ProSiteProfiles ARID domain profile. 17 116 IPR001606 GO:0003677
Phac7g03173 293 Gene3D High mobility group box domain 183 261 IPR036910 -
Phac7g03173 293 CDD ARID 56 112 - -
Phac7g03173 293 Pfam HMG-box domain 195 261 IPR009071 -
Phac7g03173 293 SUPERFAMILY HMG-box 178 259 IPR036910 -
Phac7g03173 293 Coils Coil 244 264 - -
Phac7g03173 293 Pfam ARID/BRIGHT DNA binding domain 50 112 IPR001606 GO:0003677
Phac7g03173 293 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 50 271 - -
Phac7g03173 293 MobiDBLite consensus disorder prediction 249 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03173 Phac-Chr7 34684244 34686919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03173 56 261 ARID Transcription Factor Family AT3G13350 22.553 1.40e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Phac7g03173 HMG_box_2 3e-05 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03173 - - pvu:PHAVU_007G202100g 473.011