Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03168 ATGGATTTCCAGGGATTCCTAAACGACTTGCAGGATTGGGAACTTTCTAGAAAGGATAAAACACAAACACTGAAGTCACAAAAGGAAAATCAATTCACAAAAGCTTCATCTTCTCGACTTACTGGATCTGTGGGTGTGGAGGCATCAAAAGCAGATGCTATTTCTTTTGATCGTGCAAGAAATTCTCAAGGACTGTACGATTTATCCCAAATTAATGATCCTTTAAATCGGTTGCAGGGTAGTTTTGTTCCTGAAGATGTTCCCGATGCTGCTTCCGAGAAAGATCTGGGTAATGAGTTTTTCAAGCAAAAGAAATTTAAGGAAGCTAGAGACTGCTATTCAAGGAGCATTGCCTTATCACCAACAGCTGTAGCATATGCAAATAGGGCAATGGCCAATATCAAGCTCAGAAGATTCCAAGAGGCTGAGGATGACTGCACAGAGGCTTTAGATCTTGATGATCGTTACATAAAAGCATACTCGCGAAGAGCAACAGCTAGAAAAGAACTTGGAAAAATTAAAGAATCAATGGAGGATGCTGAATTTGCTTTGAGGTTGGAACCAAACAATCAAGAAATCAAGAAACAGTATGCTGATGCTAAATCTTTGTATGAGAAAAATATTCTTCATAAAGCATCAGGAGCTCTGAGAAAAACTGTACAGGGAACTAATAAAGTGGGAAAGTCAGAGGAAAAAGTTAATGGAGGTAGCATCCACCCCATTTCACATGGTGCTCAAAAGTCCGGTCCAGCTGAAGTTATTCATAAAAAGGTTAATGAGCAGCAAGTACCTATTAAAGAATCACTTGTAACAGAGGAGGTTGATAGCAGGGACACAATAACCAGAAAAAGGCCTCAAGCACAAGGAGGTGATGATTCTAAGAAAGGTTTGAGTGCAAGTAACAGTTTGGAGCAGAGAAATCACAGAATTATTAAGCCAGAATTTAAAGCATCTGTTCAACAGCTTGCTTCTCGTGCTGCTTCTAGAGCCATGGCTGAAGCTGCCAAAAACATAACACCACCAACCACTGCGTATGAATTTGAGGTCTCTTGGAGAGCATTGTCAGGTGATCTTGCTCTGCAGGCTCGTCTGTTAAAGGCTATATCTCCCCGTGAATTACCGAAAATATTCAAAAATGCCTTATCTTCTACCATACTTGTTGACATCATCAAGTGTCTTTCATCTTTTTTCACTGAGGACATGGATCTGGTTGTCAGTTATATGGAGCATTTGATCAAAGTTCCAAGATTTGACATGATTGTACTGTGCCTTTCATCAACAAATAAGGATGACATACGCAAGATCTGGGATGAAGTGTTCAGAAGTAAGGCAACACCAATTGAATATGCAGAGATTCTAGACAACCTCCGATCAAAGTTCTGCCTTGGACAGTGA 1395 0.4014 MDFQGFLNDLQDWELSRKDKTQTLKSQKENQFTKASSSRLTGSVGVEASKADAISFDRARNSQGLYDLSQINDPLNRLQGSFVPEDVPDAASEKDLGNEFFKQKKFKEARDCYSRSIALSPTAVAYANRAMANIKLRRFQEAEDDCTEALDLDDRYIKAYSRRATARKELGKIKESMEDAEFALRLEPNNQEIKKQYADAKSLYEKNILHKASGALRKTVQGTNKVGKSEEKVNGGSIHPISHGAQKSGPAEVIHKKVNEQQVPIKESLVTEEVDSRDTITRKRPQAQGGDDSKKGLSASNSLEQRNHRIIKPEFKASVQQLASRAASRAMAEAAKNITPPTTAYEFEVSWRALSGDLALQARLLKAISPRELPKIFKNALSSTILVDIIKCLSSFFTEDMDLVVSYMEHLIKVPRFDMIVLCLSSTNKDDIRKIWDEVFRSKATPIEYAEILDNLRSKFCLGQ* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03168 464 SMART tpr_5 124 156 IPR019734 GO:0005515
Phac7g03168 464 SMART tpr_5 157 190 IPR019734 GO:0005515
Phac7g03168 464 SMART tpr_5 90 123 IPR019734 GO:0005515
Phac7g03168 464 MobiDBLite consensus disorder prediction 270 290 - -
Phac7g03168 464 Gene3D Tetratricopeptide repeat domain 83 188 IPR011990 GO:0005515
Phac7g03168 464 ProSiteProfiles TPR repeat profile. 90 123 IPR019734 GO:0005515
Phac7g03168 464 SUPERFAMILY TPR-like 88 205 IPR011990 GO:0005515
Phac7g03168 464 Pfam Potential Monad-binding region of RPAP3 340 429 IPR025986 -
Phac7g03168 464 MobiDBLite consensus disorder prediction 264 303 - -
Phac7g03168 464 PANTHER OS05G0129900 PROTEIN 1 463 - -
Phac7g03168 464 MobiDBLite consensus disorder prediction 222 249 - -
Phac7g03168 464 ProSiteProfiles TPR repeat profile. 157 190 IPR019734 GO:0005515
Phac7g03168 464 Pfam Tetratricopeptide repeat 125 153 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03168 Phac-Chr7 34611448 34617214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03168 51 194 Calmodulin-binding Proteins AT3G25230 26.250 8.13e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03168 K23002 - gmx:100784528 729.169