Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03135 ATGTGTTGCACTCTTAATTTTTGCAGTAGGGGTCCAAATGCAATCAATGTGGGACTACCTCCTGCGTGGGTGGATTTGTCGGAAGAAATATCAGCAAATGTGCAACGTGCACGAACAAAAATGGCAGAGTTGGCCAAGGCTCACGCAAAGGCTTTGATGCCGTCATTTGGAGATGGGAAAGAAGATCAACATACTATCGAGACTCTAACACACGAGATAACTGACTTAATAAAGAAGTCGGAGAAGAGACTTCGGAGACTTTCTGCTTCTGGGCCTTCTGAGGATTCCAATGTCAGGAAAAACGTCCAGCGATCTATTGCTACTGACCTTCAGAACCTCTCTGTTGAGCTACGCAAGAAACAATCAACTTATTTAAAGCGCCTCAGACTACAAAAAGAGGGTCAAGATGGAGTTGATCTAGAGATCAACTTAAATGGAGGTAAATCAAGATACGAAGATGATGATTTGGATAATATGGTATTTAATGAGCATCAAATGGCCAAGCTAAAAAAAAGTGAAGCATTCACAGTAGAAAGAGAGAAAGAGATCCAGCAGGTTGTGGAATCTGTGAACGAGCTTGCTCAGATCATGAAGGATTTATCAGTACTAGTTATAGACCAGGGAACCATCGTCGATAGAATAGACTACAACATTCAGAATGTTGCAACCACAGTTGAGGATGGCCTTAAACAGCTGCAGAAGGCAGAGAGAACTCAGAAAAAGGGGGGTATGGTAATGTGTGCTACTGTGCTTGTCATCATGTGCTTCGTAATGTTGGTTCTCTTAATCATTAAGGAAATTATATTGTGA 810 0.4173 MCCTLNFCSRGPNAINVGLPPAWVDLSEEISANVQRARTKMAELAKAHAKALMPSFGDGKEDQHTIETLTHEITDLIKKSEKRLRRLSASGPSEDSNVRKNVQRSIATDLQNLSVELRKKQSTYLKRLRLQKEGQDGVDLEINLNGGKSRYEDDDLDNMVFNEHQMAKLKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKGGMVMCATVLVIMCFVMLVLLIIKEIIL* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03135 269 CDD SNARE_syntaxin16 178 234 - -
Phac7g03135 269 SMART SynN_4 14 129 IPR006011 GO:0016020
Phac7g03135 269 Gene3D - 20 227 - -
Phac7g03135 269 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Phac7g03135 269 Coils Coil 27 47 - -
Phac7g03135 269 PANTHER SYNTAXIN 27 254 IPR045242 -
Phac7g03135 269 FunFam Syntaxin-43 20 227 - -
Phac7g03135 269 SUPERFAMILY t-snare proteins 19 228 IPR010989 GO:0016020|GO:0016192
Phac7g03135 269 Pfam SNARE domain 209 261 IPR000727 -
Phac7g03135 269 SMART tSNARE_6 168 235 IPR000727 -
Phac7g03135 269 ProSitePatterns Syntaxin / epimorphin family signature. 179 218 IPR006012 GO:0005484|GO:0006886|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03135 Phac-Chr7 34449338 34454371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03135 8 258 SNARE and Associated Proteins AT3G05710 80.876 7.07e-150 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03135 K08489 - gmx:100796741 458.759