Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03134 ATGTGTTGCACTCTTAATTTTTGCAGGGGTCCAAATGCAATCAATGTGGGACTACCTCCTGCGTGGGTGGATTTGTCGGAAGAAATATCAGCAAATGTGCAACGTGCACGAACAAAAATGGCAGAGTTGGCCAAGGCTCACGCAAAGGCTTTGATGCCGTCATTTGGAGATGGGAAAGAAGATCAACATACTATCGAGACTCTAACACACGAGATAACTGACTTAATAAAGAAGTCGGAGAAGAGACTTCGGAGACTTTCTGCTTCTGGGCCTTCTGAGGATTCCAATGTCAGGAAAAACGTCCAGCGATCTATTGCTACTGACCTTCAGAACCTCTCTGTTGAGCTACGCAAGAAACAATCAACTTATTTAAAGCGCCTCAGACTACAAAAAGAGGGTCAAGATGGAGTTGATCTAGAGATCAACTTAAATGGAGGTAAATCAAGATACGAAGATGATGATTTGGATAATATGGTATTTAATGAGCATCAAATGGCCAAGCTAAAAAAAAGTGAAGCATTCACAGTAGAAAGAGAGAAAGAGATCCAGCAGGTTGTGGAATCTGTGAACGAGCTTGCTCAGATCATGAAGGATTTATCAGTACTAGTTATAGACCAGGGAACCATCGTCGATAGAATAGACTACAACATTCAGAATGTTGCAACCACAGTTGAGGATGGCCTTAAACAGCTGCAGAAGGCAGAGAGAACTCAGAAAAAGGGGGGTATGGTAATGTGTGCTACTGTGCTTGTCATCATGTGCTTCGTAATGTTGGTTCTCTTAATCATTAAGGAAATTATATTGTGA 807 0.4176 MCCTLNFCRGPNAINVGLPPAWVDLSEEISANVQRARTKMAELAKAHAKALMPSFGDGKEDQHTIETLTHEITDLIKKSEKRLRRLSASGPSEDSNVRKNVQRSIATDLQNLSVELRKKQSTYLKRLRLQKEGQDGVDLEINLNGGKSRYEDDDLDNMVFNEHQMAKLKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATTVEDGLKQLQKAERTQKKGGMVMCATVLVIMCFVMLVLLIIKEIIL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03134 268 Gene3D - 19 226 - -
Phac7g03134 268 ProSitePatterns Syntaxin / epimorphin family signature. 178 217 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phac7g03134 268 PANTHER SYNTAXIN 26 253 IPR045242 -
Phac7g03134 268 Pfam SNARE domain 208 260 IPR000727 -
Phac7g03134 268 SUPERFAMILY t-snare proteins 18 227 IPR010989 GO:0016020|GO:0016192
Phac7g03134 268 CDD SNARE_syntaxin16 177 233 - -
Phac7g03134 268 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 172 234 IPR000727 -
Phac7g03134 268 SMART SynN_4 13 128 IPR006011 GO:0016020
Phac7g03134 268 Coils Coil 26 46 - -
Phac7g03134 268 SMART tSNARE_6 167 234 IPR000727 -
Phac7g03134 268 FunFam Syntaxin-43 19 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03134 Phac-Chr7 34449338 34454371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03134 6 257 SNARE and Associated Proteins AT3G05710 80.556 5.90e-150 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03134 K08489 - gmx:100796741 458.373