Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03115 ATGTCGTCTGAGCCGCTGATTCCACCGTCGGAAGCATTGTCAACTTCTCACTCCTTCAGGCGATGCGGCGAAACGGTGTGGATTTTCGACGAGTTGCCGAAGGCCACCGTCGTTTCCGTGTCGAGGCCTGATACCGGAGACATTAGCTCAATCCTCCTTTCTTATACCATTCAGTTGCAGTACAAACAGTTTAACTGGCGTTTAGTGAAGAAGGCATCACAACTTCTTTATTTACAGTTCTGTCTGCGGAAACGTGCAATAATTGAGGATTTTCATGACAGGCAAGAGCAGTTGAAAGAATGGCTTCAAAACTTGGGGATAGTGGATCAAACGGTAATAGAGCAAGAAGATGAAGAGCCTGATGATGGAGCTGTTCCTTTACTTCATGAAGACAGTGTTAAAAACAGATATGTTCCATCCGTTGCTGCTCTACCAATAATTCGTCCATCACTAGGAGGGCAGCAGTCAATTGCTGATAAAGCCAAAGTCGCAATGCAGGGTTATTTGAATCATTTTTTAGGAAACTTGGATATTGTGAATTCTCAAGAGGTCTGCAAGTTTTTGGAAGTCTCCAAGCTATCCTTTTTACAGGAGTATGGTCCAAAACTGAAAGAGGGATATGTAATGGTGAAGCATTTCTCAAATATCTCACGGGATTTGGATGTATCATGTTTCCCATGCAATTGGTTTCGTTGTTGTAATAACAGCTGGAAGAAGGTATGGGCTGTGTTGAAACCTGGGTTTTTGGCCCTCCTGGATGATCCCTTCAACAACAAACCACTGGATATAATTATTTTTGATATCCTCCCTTCCTCTGATGGAGCTGGAGGGACCAAAACATATTTAGCTGATCCTGTAAAAGAACGCAATCCTTTGCGTTATTCATTCAAGGTTACTAGTGGAAATAGGAGCATATTGTTGAGAACTACCACTAGTGCTAAAGTAAAAGCTTGGGTTGCTGCAATAAACGAAGCTAGTCTAAGACCTCTTGAAGGTTGGTGTTGTCCTCATCGCTTTGGTTCCTTTGCTCCCATAAGAGGTTTGACTGAAGATGGGAGCCAAGCCCAATGGTTTGTTGATGGACAGGCAGCATTTGAAGCTATTGCTACATCAATTCAAGATGCAAAGTCAGAGATCTTCATTACGGGCTGGTGGCTATGTCCAGAGCTATATCTGAGGCGTCCTTTTGATAGTTTTTCTACCTCTCGGTTAGATTCCTTACTAGAAGAAAAGGCTAAGCAAGGGGTTCAGATCTATGTGCTTCTCTACAAGGAGGTTTCTCTAGCTTTGAAAATCAACAGCTTGTACAGCATGAGAAGACTGCTCAAAATTCATGAGAATGTGAAGGTATTGCGCTATCCGGATCATTTTGCTGCTCGTGTGTATTTATGGTCGCACCATGAAAAACTTGTAATTATTGATTACAAGATTTGCTATATTGGAGGTTTAGATTTATGCTTTGGTCGATATGACACACCTGAACATAAAGTGGGTGACTGCCCTTCTGTAATATGGCCTGGAAAGGACTATTACAACCCAAGGGAATCTGAGCCAAATTCATGGGAAGACACCATGAGAGATGAATTGAATCGCAAGAAATATCCCCGAATGCCATGGCATGATGTCCATTGTGCTCTTTGGGGACCTCCCTGTCGGGACATTGCTCGTCATTTTATTCAACGTTGGAACCATGCTAAGAGAACCAAAGCTCCAAATGAACATGCAATTCCTCTACTTATACCTCACCATCACATGGTCATTCCTCATTACATGGGAAGAAGCAGAGAGATAGACATTGAAGAAAAGAAAGATGAAGACAAGAGGAAAGAAATTGTCAGGCAAGATTCATTTTCTTCAGAGTCTCCAATGCAAGATATACCACTACTTTTACCGCAAGAAGCTGGTGGAATTCTTACTTCAAATGGAGATCGTACAAATTTTAGTGAAATTTCTCCATTGATGGAGGACGAAACTCTAGTTTCAGACACCCAGACGAAAGGTTTTCAAGATGAAGTTGTTCCTTTACACTTGGGAGCACAATCTTTTGTCGATGTTCTAGAGGATTGGTGGGAAGCACCAGAAGGCACCAATGATGACACTACTTTGGAGTATGGACAAGTTGGTCCACGCACCACCTGTCAGTGCCAGGTAATAAGAAGTGTCAGCCAGTGGTCTGCTGGAACAAGTCAGCCTGAAGAAAGCATTCACACTTCATATTGTTCCCTCATTGAAAAAGCAAAACATTTTATCTACATTGAGAACCAATTTTTCATATCAGGTCTATCAGGGGATGACATAATACAGAACCGTATTTTGGAAGCTCTATATAGGCGTATTTTGCAAGCCCACAAAGAACAGAAAGATTTTAGAGTTATTGTAGTAATTCCCCTCTTACCTGGCTTCCAGGGTGGTCTAGATGATGGTGGTGCTGCTACTGTGAGAGCCTTAACACATTGGCAGTATAGAACGATTTCTAGAGAAAAGCACTCGATATTATACAATCTTGAAACTATACTTGGTCCTAAGACTCATGATTATATTTCATTCTATGGTTTACGATCTCATGGTAGACTCTATGAAAATGGTCCTGTGGCTACAAGTCAGGTGTATGTGCACAGTAAATTGATGATAATTGATGATCGTGTAGCTTTTATTGGATCATCCAATATAAATGACCGCAGTTTGCTTGGTTTAAGAGACTCTGAGGTGCCTTGA 2715 0.4173 MSSEPLIPPSEALSTSHSFRRCGETVWIFDELPKATVVSVSRPDTGDISSILLSYTIQLQYKQFNWRLVKKASQLLYLQFCLRKRAIIEDFHDRQEQLKEWLQNLGIVDQTVIEQEDEEPDDGAVPLLHEDSVKNRYVPSVAALPIIRPSLGGQQSIADKAKVAMQGYLNHFLGNLDIVNSQEVCKFLEVSKLSFLQEYGPKLKEGYVMVKHFSNISRDLDVSCFPCNWFRCCNNSWKKVWAVLKPGFLALLDDPFNNKPLDIIIFDILPSSDGAGGTKTYLADPVKERNPLRYSFKVTSGNRSILLRTTTSAKVKAWVAAINEASLRPLEGWCCPHRFGSFAPIRGLTEDGSQAQWFVDGQAAFEAIATSIQDAKSEIFITGWWLCPELYLRRPFDSFSTSRLDSLLEEKAKQGVQIYVLLYKEVSLALKINSLYSMRRLLKIHENVKVLRYPDHFAARVYLWSHHEKLVIIDYKICYIGGLDLCFGRYDTPEHKVGDCPSVIWPGKDYYNPRESEPNSWEDTMRDELNRKKYPRMPWHDVHCALWGPPCRDIARHFIQRWNHAKRTKAPNEHAIPLLIPHHHMVIPHYMGRSREIDIEEKKDEDKRKEIVRQDSFSSESPMQDIPLLLPQEAGGILTSNGDRTNFSEISPLMEDETLVSDTQTKGFQDEVVPLHLGAQSFVDVLEDWWEAPEGTNDDTTLEYGQVGPRTTCQCQVIRSVSQWSAGTSQPEESIHTSYCSLIEKAKHFIYIENQFFISGLSGDDIIQNRILEALYRRILQAHKEQKDFRVIVVIPLLPGFQGGLDDGGAATVRALTHWQYRTISREKHSILYNLETILGPKTHDYISFYGLRSHGRLYENGPVATSQVYVHSKLMIIDDRVAFIGSSNINDRSLLGLRDSEVP* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03115 904 Gene3D Endonuclease Chain A 348 585 - -
Phac7g03115 904 SUPERFAMILY Phospholipase D/nuclease 706 900 - -
Phac7g03115 904 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 462 489 IPR001736 GO:0003824
Phac7g03115 904 CDD PLDc_vPLD1_2_yPLD_like_1 355 500 - -
Phac7g03115 904 Gene3D Endonuclease Chain A 691 903 - -
Phac7g03115 904 SMART PH_update 202 329 IPR001849 -
Phac7g03115 904 Pfam PH domain 204 326 IPR001849 -
Phac7g03115 904 SMART pld_4 867 894 IPR001736 GO:0003824
Phac7g03115 904 SMART pld_4 462 489 IPR001736 GO:0003824
Phac7g03115 904 FunFam Phospholipase 701 904 - -
Phac7g03115 904 CDD PH_PLD 179 325 - -
Phac7g03115 904 MobiDBLite consensus disorder prediction 600 615 - -
Phac7g03115 904 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 867 894 IPR001736 GO:0003824
Phac7g03115 904 SUPERFAMILY Phospholipase D/nuclease 315 582 - -
Phac7g03115 904 PANTHER PHOSPHOLIPASE D 160 903 IPR015679 -
Phac7g03115 904 CDD PLDc_vPLD1_2_yPLD_like_2 727 903 - -
Phac7g03115 904 Pfam Phospholipase D Active site motif 462 489 IPR001736 GO:0003824
Phac7g03115 904 Gene3D - 200 331 IPR011993 -
Phac7g03115 904 MobiDBLite consensus disorder prediction 600 623 - -
Phac7g03115 904 PIRSF PLD_euk 502 904 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac7g03115 904 PIRSF PLD_euk 34 507 IPR016555 GO:0004630|GO:0006654|GO:0048017
Phac7g03115 904 SUPERFAMILY PH domain-like 233 332 - -
Phac7g03115 904 ProSiteProfiles PH domain profile. 201 327 IPR001849 -
Phac7g03115 904 Pfam PLD-like domain 740 900 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03115 Phac-Chr7 34291459 34301573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03115 24 903 Phospholipase D Gene Family (Wang group) AT3G16785 67.857 0.0 1188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03115 K01115 - gmx:100796914 1674.45