Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03102 ATGAAGACCTGGACAACCTTCTACAACCTTGTTTTTCTCTTCATTCTCTTCCATTCTTCTTCTCTTCTAGCTTTCTCCTCCTTCTCACATACCACATGCAACAATACACCCTACCCAGCATTCTGCAAAACCACTCTACCTCCTCAATATATATCCACACATGACCAATGCCGTTTCCTCCTTCAGCAATGCTTATCAACCACAAAAACGATTGCTGCATTGATCTCTTCTTATCTCACAAACCACTACGCCATTCCCGCTTCAACAGTACACGCCCTTGAAGATTGCTTCAACCTTTCAGAACTCAACATTGATTTCTTGTCCAATGTCCTCCAAGCCATTCAAAACACCGTCACTGGCTATCAGGTCTACGACTTGCAAACCTTGCTTAGTGCCACTTTAACCAACCAACAAACGTGCTTGAATGGTTTTAACGAGGTAACTCCCTATCCTGTAGTTACCAGTGCCTTATCAAGTCCCCTTTCTGATGCGATCAAACTATATAGCACATCTCTAGCCCTTTTCACCCGTGGTTGGGTTAGCGATGCCATGCAAGGATCAACCACAGTTGAGACTATTACTAATAGAAAGTTACTGCAAACAAGCTTTGACAATGTGGAGGTGAGGCAAAAAGTGGTGGTGAACCCTGATGGGTCTGCTGATTTCACCACCATAAATGATGCAGTGGCTGCTGCACCTGAAAACACCGGCACCAACAACGGGTACCATGTAATCTATGTTGTCGAGGGGATTTACAATGAGTACGTGTCTATTCCTAAGAACAAGCAGAACCTAATGTTGATTGGAGATGGCATCAACCGCACTGTGCTCACTGGCGATCGCAGCGTGGTCGATGGCTGGACCACTTTCCAATCTGCGACTTTTGCTGTTGTTGGAAAAGGGTTTGTTGCTGTGAACATAACATTTCGTAACACTGCTGGGTCCAGTAAGCATCAAGCTGTGGCTGTGAGAAACGGGGCGGACATGTCTACGTTCTACAATTGCAGTTTTGAGGGTTACCAAGACACACTGTACGTACATTCCCAAAGGCAATTCTACAAAAGCTGTGACATTTATGGCACAGTGGATTTTATATTTGGCAATGCAGCAACAGTATTCCAGGATTGTAGCATTTATCCAAGACTTCCTATGCAAAACCAATTCAATGCAATCACAGCACAAGGTCGAACAGATCCAAACCAAAACACTGGCATCTCCATACAGAACTGTTGCATAATAGCAGCCAGTGAGTTGGGTGATGCTACTAGCAACTATAATGGAATACAGACATATTTGGGTAGGCCTTGGAAGGAGTATTCTAGGACTGTTTACATACAATCTTTCATGGATGGCCTAATTGATCCAAAGGGGTGGAATGAATGGTCAGGGGATTTTGCTTTGAGCACACTGTATTATGCAGAGTTTGCTAACTGGGGACCTGGTTCAAACACGAACAATAGGGTCACATGGGAAGGGTACCATCTCATAGACGAAAAGGATGCACTTGATTTCACGGTGCAGAAGTTTATTCAAGGTGACAAATGGCTACCCACCACAGGAGTACCTTTCAAAGCAGGGTTACAGTAA 1587 0.443 MKTWTTFYNLVFLFILFHSSSLLAFSSFSHTTCNNTPYPAFCKTTLPPQYISTHDQCRFLLQQCLSTTKTIAALISSYLTNHYAIPASTVHALEDCFNLSELNIDFLSNVLQAIQNTVTGYQVYDLQTLLSATLTNQQTCLNGFNEVTPYPVVTSALSSPLSDAIKLYSTSLALFTRGWVSDAMQGSTTVETITNRKLLQTSFDNVEVRQKVVVNPDGSADFTTINDAVAAAPENTGTNNGYHVIYVVEGIYNEYVSIPKNKQNLMLIGDGINRTVLTGDRSVVDGWTTFQSATFAVVGKGFVAVNITFRNTAGSSKHQAVAVRNGADMSTFYNCSFEGYQDTLYVHSQRQFYKSCDIYGTVDFIFGNAATVFQDCSIYPRLPMQNQFNAITAQGRTDPNQNTGISIQNCCIIAASELGDATSNYNGIQTYLGRPWKEYSRTVYIQSFMDGLIDPKGWNEWSGDFALSTLYYAEFANWGPGSNTNNRVTWEGYHLIDEKDALDFTVQKFIQGDKWLPTTGVPFKAGLQ* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03102 528 Pfam Plant invertase/pectin methylesterase inhibitor 28 174 IPR006501 GO:0004857
Phac7g03102 528 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Phac7g03102 528 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 177 IPR035513 -
Phac7g03102 528 SUPERFAMILY Pectin lyase-like 212 526 IPR011050 -
Phac7g03102 528 CDD PMEI-like_3 31 179 - -
Phac7g03102 528 Gene3D - 205 527 IPR012334 -
Phac7g03102 528 PANTHER PECTINESTERASE 20 518 - -
Phac7g03102 528 SMART PMEI_2 24 174 IPR006501 GO:0004857
Phac7g03102 528 FunFam Pectinesterase 205 527 - -
Phac7g03102 528 Pfam Pectinesterase 212 513 IPR000070 GO:0030599|GO:0042545
Phac7g03102 528 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 177 IPR035513 -
Phac7g03102 528 NCBIfam pectinesterase inhibitor domain 6 174 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03102 Phac-Chr7 34238674 34240673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03102 10 527 Carbohydrate Esterase AT4G02330 50.265 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03102 K01051 - gmx:100810329 880.167