Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03083 ATGGGAAGGAATGCGATGGATTGGAACGATACATGTTCGGACCAAGTAATTGCGGAAATGATTGAAATGGGTTTCGAGTATTCCAGCATCGTGGAAGCCATAAAAGTAGTGGGTCCATCTATTCCCAGCGCTGTGGAACACATTCTCAATTCTACTACTGGAGAAGCATCCACAACCCACATCTCCAATTCGGATGCAAGCAATGGGAATGCTCGCAAGAAACGACCTTTGCGCACATCCCGTTTAGTTCGACAGTCCAAGATATTCGACCATTTCCATTCCAATGATGATGTCAAAGAACACAAGGAGGATCTCCCTCAATTGGGAATTGATCCCAATCCCATTGTGCTTTCAGAGCCTTTTGAAGCGCCATATTTGGATGTTCAATCTGATTGGGAGCAGAAAATTAGCAATCTGATGAAAAAGCATTTTGGTTTTTCATCCTTGAAGAGTTTTCAGAAGGAAGCCATCTCTGCCTGGGTTGCTCATAAAGATTGTCTTGTCCTCGCTGCAACAGGATCTGGGAAATCTCTGTGCTTTCAGATTCCTGCATTGTTGTCTGGGAAAGTCGTGGTTGTGATTTCGCCCTTGATAAGCCTCATGCATGACCAGTGTTTAAAGCTAACTAGACATGGTATCAGTGCGTGCTTTCTTGGCTCTGGGCAACCAGATAATACCGTTGAACAGAAAGCGATGAGAGGATTGTATAGTACAGTGTATATCTGCCCAGAGACTGTTCTAAGATTGATTCAACCACTGCAGACGCTTGCAGAAAGTCGTGGTATCGCTTTATTTGCAATTGATGAGGTACACTGTGTTTCAAAATGGGGTCATGATTTTCGTCCAGATTACAGGCGACTGTCTGTACTGAGAGAAAATTTCAGTACTAGCAAGCTAAAATCCCTAAAATTTGATATACCTCTGATGGCCTTAACAGCTACAGCCACAAAAAGAGTTCGAGAAGACATTTTAAAATCATTGCACATGTCAAAAGAAACGAAAGTTTTTCTTACATCATTTTTTCGATCAAATTTACGCTTCATGGTAAAGCATAGTCGAGCATCACAGGCTTCTTATGCAAAAGATTTTCATGAATTGATTCATGTATATGGTAGTAAGAAAAATATTGATGAAAATGAAAAGGTTTTCATCTCAGATGATTCAGATCAGCTTTCTAATAGCTCCAATGCTAGTAGTATCTCTGATACAGACAGTGTTTCACCTGATGACATGGATGACAACCAAGATGATTATGCTTATAGAGATGTTAATATAATGCACGCAGGAAACACAGATGATTTTTTAACGGGAAAAGAATTGTCAATTGAGTTCCTGGAAAATGATATCAATACCTTTCAAAGTGTTGATAACTTAGATGTTACCCATGGTGACTTTTGTGTTCTACCTCACAAGGAATTGGAATTATCCGAGACAACTGACCTACCTAAGAAACCAGAAGGAAGAGTAAAAATTCTGAAAGAACCTTTGGAACAAGGACCAACAATCATTTATGTGCCCACCAGAAAAGCAACTCTGAGAATTGCGAAGTACCTATGCAAGTTTGGTGTGAAGGCAGCTGCTTATAATGCAGGGCTCACCAAATTGCATCTAAGAAAGGTTCATAAAGAGTTTCATGAAAATAATTTACAGGTTGTTGTTGCTACAATAGCTTTTGGAATGGGTATTGACAAATCAAATGTCAGAAGAATCATCCACTATGGTTGGCCACAGAGTTTAGAATCATACTACCAAGAAGCTGGACGGGCTGGTCGAGATGGGAAATTAGCAGATTGTATTCTGTATGCAAACCTAGCAAGCAAGCCATCACTTTTGCCTAGTCGAAAAAGTGAAGCTCAGAAAAAACAAGCATATATTATGTTGTCTGATTGTTTCAGATATGGAATGAATACTTCCTGCTGTCGAGCAAAGATACTCGTTGAATACTTTGGAGAGGATTTCAGTCATCGGAAATGCCTCTTATGTGATGTGTGCACTGCCGGTCCACCTCAAAAGCAGAATCTAAAAGAGGAGGCCTGTATTTTGCTGCCAACCATAGGTGCCCATAATGGATGTAGGGATTCCAAGGATTGCTCATATGACGATGATATACATTTTGACTCCAATTACAGAGGACCAAGAGAGAGGCCAAATCTTAAGATGTTGGTTGGAACAATAAGGCAGCAGTTTCAAAAGTTTTCAACCACTGATGAATTATGGTGGAGAGGTCTTGCTCGAATTTTGGAAGTTAAAGGATATATCAGAGAAGGAGATGACAAGACCCATGTTCAGGCAAAATACCCGGAGCCAACAGAATTGGGATGGGAATTTGTGAAGTCCATGAAGGAGGAGGCTTTCTATGTTTACCCTGAAGCAGATATGTTGCTTGCAAGAAACTTAATTAACAAACCATTTTCTTCATTCTCGGAATGGGGAAAGGGTTGGGCTGATCCTGAGATCCGTCGCCAGCGCCTAGAAAGAATGGGAGTGAATAGAAAGTCAGGGATGGTGTCAAGTTCCAAAAGGAAACGAAAGAGAAAAGGTAGAAAAGTGCAACATGATTTGAGGACTTCTCGTGGCAGACTAGGAGCAAAACTCTCAAAATATAAGTGA 2610 0.4065 MGRNAMDWNDTCSDQVIAEMIEMGFEYSSIVEAIKVVGPSIPSAVEHILNSTTGEASTTHISNSDASNGNARKKRPLRTSRLVRQSKIFDHFHSNDDVKEHKEDLPQLGIDPNPIVLSEPFEAPYLDVQSDWEQKISNLMKKHFGFSSLKSFQKEAISAWVAHKDCLVLAATGSGKSLCFQIPALLSGKVVVVISPLISLMHDQCLKLTRHGISACFLGSGQPDNTVEQKAMRGLYSTVYICPETVLRLIQPLQTLAESRGIALFAIDEVHCVSKWGHDFRPDYRRLSVLRENFSTSKLKSLKFDIPLMALTATATKRVREDILKSLHMSKETKVFLTSFFRSNLRFMVKHSRASQASYAKDFHELIHVYGSKKNIDENEKVFISDDSDQLSNSSNASSISDTDSVSPDDMDDNQDDYAYRDVNIMHAGNTDDFLTGKELSIEFLENDINTFQSVDNLDVTHGDFCVLPHKELELSETTDLPKKPEGRVKILKEPLEQGPTIIYVPTRKATLRIAKYLCKFGVKAAAYNAGLTKLHLRKVHKEFHENNLQVVVATIAFGMGIDKSNVRRIIHYGWPQSLESYYQEAGRAGRDGKLADCILYANLASKPSLLPSRKSEAQKKQAYIMLSDCFRYGMNTSCCRAKILVEYFGEDFSHRKCLLCDVCTAGPPQKQNLKEEACILLPTIGAHNGCRDSKDCSYDDDIHFDSNYRGPRERPNLKMLVGTIRQQFQKFSTTDELWWRGLARILEVKGYIREGDDKTHVQAKYPEPTELGWEFVKSMKEEAFYVYPEADMLLARNLINKPFSSFSEWGKGWADPEIRRQRLERMGVNRKSGMVSSSKRKRKRKGRKVQHDLRTSRGRLGAKLSKYK* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03083 869 SMART ultradead3 145 350 IPR014001 -
Phac7g03083 869 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 604 IPR027417 -
Phac7g03083 869 Pfam RecQ zinc-binding 614 665 IPR032284 -
Phac7g03083 869 Gene3D - 472 602 IPR027417 -
Phac7g03083 869 SUPERFAMILY UBA-like 12 51 IPR009060 GO:0005515
Phac7g03083 869 FunFam ATP-dependent DNA helicase 474 602 - -
Phac7g03083 869 PANTHER DNA HELICASE RECQ FAMILY MEMBER 129 751 - -
Phac7g03083 869 MobiDBLite consensus disorder prediction 387 405 - -
Phac7g03083 869 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 157 333 IPR014001 -
Phac7g03083 869 Pfam Helicase conserved C-terminal domain 489 592 IPR001650 -
Phac7g03083 869 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 11 51 IPR015940 -
Phac7g03083 869 MobiDBLite consensus disorder prediction 826 869 - -
Phac7g03083 869 MobiDBLite consensus disorder prediction 53 77 - -
Phac7g03083 869 NCBIfam RecQ family ATP-dependent DNA helicase 139 368 IPR004589 GO:0004386|GO:0006310
Phac7g03083 869 Gene3D - 119 341 IPR027417 -
Phac7g03083 869 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 488 639 IPR001650 -
Phac7g03083 869 Pfam DEAD/DEAH box helicase 152 319 IPR011545 GO:0003676|GO:0005524
Phac7g03083 869 SMART helicmild6 512 593 IPR001650 -
Phac7g03083 869 FunFam ATP-dependent DNA helicase 604 782 - -
Phac7g03083 869 FunFam ATP-dependent DNA helicase 118 341 - -
Phac7g03083 869 Gene3D - 605 787 IPR036388 -
Phac7g03083 869 MobiDBLite consensus disorder prediction 836 853 - -
Phac7g03083 869 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 203 IPR027417 -
Phac7g03083 869 MobiDBLite consensus disorder prediction 387 414 - -
Phac7g03083 869 CDD DEXHc_RecQ 140 340 - -
Phac7g03083 869 MobiDBLite consensus disorder prediction 53 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03083 Phac-Chr7 34053143 34060027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03083 492 611 Eukaryotic Initiation Factors Gene Family AT5G11170 27.500 2.41e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03083 K10900 - gmx:100793222 1362.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03083 7 34053143 34060027 Phac7g03083 7 34053143 34060027 ECH