Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03074 ATGGATCACGCGCGATCGACCAACGGCGAGGACAATGCGGCGGGAATTCCGGACGACTTGCGGTGCAAGAGGTCAGACGGAAAGCAGTGGCGTTGCACGGCCATGTCGATGCCGGACAAGACGGTGTGCGAGAAGCACTACATCCAGGCGAAGAAGCGCGCCGCGAATTCCGCAATGAGGGCCAACCTCAAGAAAGCCAAGAGGAAGTCGCAGTCGCTGAACGAGTCTGATGTTTATTTGGAGAGTAAGAGTGACGATTTCGACGTTCCTCTCTCCGCTATAAGCCTTTCGCAGAAGAAGCTCTCGAAGAACCAGTTTCGTTACACGCCCGAGCGTGACGCGCGAAGAGCCTCCTCTGCGAGACATGCTCATGACGAGGTGGATGTGGATGCGGATGTGGATGTGGATGCGGATGTGGATGTGGATGTGGATGCGGATGTGGATGTGGATGCGGATGCGGATGCGGATGTGGCGCTCTATGAAGAAGACAATTGGGTCTCCTATGATTCCCCGCCGGACTCCTCGCGCAAAAGATCGCGAAGGAGCTTGGATGCTAATGCCACTACTGAATATTCCGACGGAACCTCTGGTTCTTCTGAAGACACCGGCGGGCAGACTTGTCATCAGTGCCGGAGGAATGACCGAGATAGAGTTACTTGGTGCTTAAGATGTGACAGGAGGGGATACTGTGATAGCTGTATATCAGCATGGTACTCGGACATTTCGTTGGATGAAATTCAGAGGATATGTCCTGCTTGCCGTGGTATATGTAATTGCAAGACTTGCTTGCGGAGTGATAATTCTATCAAGGTTCGGATACGCGAGATACCTGTTCTGGATAAGTTACAGTATCTTCATGTCTTGCTATCGTCGGTGCTTCCTGTGGTAAAGCAGATCCACCGTGAACAGTGTTTTGAAGTTGAACTTGAAAAGAAGTTGCGTGGTGCTGAAATAGATCTTCCGAGAATAAAATTCAACACAGATGAGCAGATGTGCTGCAATTTCTGTAGGATACCTATTACTGATTATCATCGACGCTGTCCAAATTGCTCATATGATTTGTGCCTTAATTGCTGTCGAGATCTTCGAGAAGCAACTGCTGATCGCAATGAAGAACCCCAGACAGAGCTGGCTAAAACTTGTGATCAAAATATATTAAGTAAATTTCCTCAATGGAGATCCAATGACAATGGAAGTATTCCATGTCCCCCTAAGGAGTATGGTGGCTGTGGCCATTCTTCATTAAACTTAAGCCGAATTTTCAAGATGAATTGGGTAGCAAAGTTGGTGAAAAATGTAGAGGAAATGGTTAGTGGCTGCAGAATTAGTAACGACTATGGTACTACACCAGAAATCGGGCTGAGTGATCTCAGACTCTACCAGTGTTCTCATAGAGAAGCCAGTGATGATAATTATCTCTATTGTCCAGCATCTGACGATATCAAAACTGATGGGATTGAAAATTTTAGAAAGCACTGGAAAACTGGTGAGCCAATTATTGTTAAGCAAGTATTTGATGGGTCATCCATTTCAAGCTGGGATCCAATGGTCATATGGAGGGGGATTCTAGAGACAACAGATGAGAAAGCGAAAGACGAGAACAGGATGGTTAAGGCCATAGATTGCTTAGATGGATCTGAGATTGATATTGAGCTGGCTCAGTTCATGAAAGGATACCTCGAAGGGCGCATTCATGATAATGGTTGGCCTCAGTTATTGAAATTGAAGGATTGGCCTTCACCTAGCGCATCTGAAGAATTTCTATTGTACCAAAGACCTGAGTTTATCAGCAAACTACCTTTACTTCAGTATATTCACTCCAAGTGGGGCCTTCTCAATGTTGCAGCTAAATTGCCTCATTACTCCTTGCAGAATGACGTAGGACCCAAGATATATATGGCTTATGGAATTAGTGATGAACTTGGAAGAGGTGATTCAGTGACAAATCTCCACTTTAATATTCGTGACATGGTTTACCTTTTGGTTCATACAAATGAAGTAAAGTTGAAGGACTGGCAGAGAACTAAAATTGAAATTATGCAAAAGGCTAAAACTAATGAGGAATCTGAGGCGAAAGAGTCACATGGGGATCCTCAAATATTTTCAAGTGGGAGTTCACTTGATTCATCACTTGGTACAAAAAGTAGTGGACTGGATATGGATTCAAACCAGAATAACTCAATTATGGATGAAGAATTTGAAATTTATTCTGGTGCTGAAGGTAATATGGTCAATTTTAAAGTCCCATCTACACAAAATGGAGATGTCTCCGAGGAAACACATCCTGGAGTTCTTTGGGATGTTTTTCGTCGGCAGGATGTTCCAATATTGACTAAATATTTGAAAATACATTGGAAGGAATTGGGGAAGTCAGGTGATGCGGGAAATGAATTTGTTGCATGGCCTCTTTATGGTGGAGCTATTTTTCTCGACAAACACCATAAAAGAAAGTTGAAGGAAGAATTTGGAGTGGAGCCTTGGTCATTTGAACAGAATTTGGGGGAAGCTATATTTGTTCCTGCTGGTTGCCCTTTCCAAGCAAGGAATGTTCAATCGAATGTTCAGCTGGGCCTTGATTTCTTATCCCCGGAAAGCCTGGGTGATGCTGTAAGATTGACAGAGGAAGTTCGCCGTTTACCTAATGAACATGAATCCAAAGTTCAAGTATTGGAGGTGGGGAAGATATCTCTCTATGCAGCAAGTTCAGCCATCAAAGAAGTTCAGAAGCTTGTACTTGACCAAAAACTTGGCGCCCAGATTGGATATGGAGACCCTAATTTGACTGCAATGGTTTCTGAGAATTATGAGAAGATGGTTAAGCGGAGGCAGATTACTTGTGCTTGA 2844 0.4423 MDHARSTNGEDNAAGIPDDLRCKRSDGKQWRCTAMSMPDKTVCEKHYIQAKKRAANSAMRANLKKAKRKSQSLNESDVYLESKSDDFDVPLSAISLSQKKLSKNQFRYTPERDARRASSARHAHDEVDVDADVDVDADVDVDVDADVDVDADADADVALYEEDNWVSYDSPPDSSRKRSRRSLDANATTEYSDGTSGSSEDTGGQTCHQCRRNDRDRVTWCLRCDRRGYCDSCISAWYSDISLDEIQRICPACRGICNCKTCLRSDNSIKVRIREIPVLDKLQYLHVLLSSVLPVVKQIHREQCFEVELEKKLRGAEIDLPRIKFNTDEQMCCNFCRIPITDYHRRCPNCSYDLCLNCCRDLREATADRNEEPQTELAKTCDQNILSKFPQWRSNDNGSIPCPPKEYGGCGHSSLNLSRIFKMNWVAKLVKNVEEMVSGCRISNDYGTTPEIGLSDLRLYQCSHREASDDNYLYCPASDDIKTDGIENFRKHWKTGEPIIVKQVFDGSSISSWDPMVIWRGILETTDEKAKDENRMVKAIDCLDGSEIDIELAQFMKGYLEGRIHDNGWPQLLKLKDWPSPSASEEFLLYQRPEFISKLPLLQYIHSKWGLLNVAAKLPHYSLQNDVGPKIYMAYGISDELGRGDSVTNLHFNIRDMVYLLVHTNEVKLKDWQRTKIEIMQKAKTNEESEAKESHGDPQIFSSGSSLDSSLGTKSSGLDMDSNQNNSIMDEEFEIYSGAEGNMVNFKVPSTQNGDVSEETHPGVLWDVFRRQDVPILTKYLKIHWKELGKSGDAGNEFVAWPLYGGAIFLDKHHKRKLKEEFGVEPWSFEQNLGEAIFVPAGCPFQARNVQSNVQLGLDFLSPESLGDAVRLTEEVRRLPNEHESKVQVLEVGKISLYAASSAIKEVQKLVLDQKLGAQIGYGDPNLTAMVSENYEKMVKRRQITCA* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03074 947 ProSiteProfiles WRC domain profile. 16 60 IPR014977 -
Phac7g03074 947 MobiDBLite consensus disorder prediction 696 724 - -
Phac7g03074 947 MobiDBLite consensus disorder prediction 1 20 - -
Phac7g03074 947 SUPERFAMILY Clavaminate synthase-like 486 885 - -
Phac7g03074 947 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 202 267 IPR018866 -
Phac7g03074 947 MobiDBLite consensus disorder prediction 164 209 - -
Phac7g03074 947 Pfam WRC 17 57 IPR014977 -
Phac7g03074 947 MobiDBLite consensus disorder prediction 185 206 - -
Phac7g03074 947 ProSiteProfiles JmjC domain profile. 581 877 IPR003347 -
Phac7g03074 947 SMART cupin_9 588 877 IPR003347 -
Phac7g03074 947 Coils Coil 56 76 - -
Phac7g03074 947 Pfam JmjC domain, hydroxylase 813 856 IPR003347 -
Phac7g03074 947 MobiDBLite consensus disorder prediction 683 724 - -
Phac7g03074 947 Gene3D Cupin 468 886 - -
Phac7g03074 947 MobiDBLite consensus disorder prediction 105 135 - -
Phac7g03074 947 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 18 912 IPR045109 GO:0032454|GO:0033169
Phac7g03074 947 MobiDBLite consensus disorder prediction 105 129 - -
Phac7g03074 947 ProSiteProfiles Zinc finger RING-type profile. 207 254 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03074 Phac-Chr7 34021914 34030930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03074 17 57 GRF Transcription Factor Family AT3G13960 46.341 2.09e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Phac7g03074 JmjC 2e-06 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03074 K15601 - gmx:100801287 1623.99