Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03073 ATGTCAAACATCACAAGTTGTGATAGTGGGAGCTTCTCAACAGAGAATACGAGAGAAGATGCAGCAGTTAAACAGAAATCTGAGATGCTTGGTCAGTTCCATAGTCCACATTCTCTTACTTCAACTACAACAACAAATAATAGCAATGGTTCCAATACAAATTCACAACCACCTGCCCCTGTTAAGAAGAAAAGGAGCCTACCAGGAAATCCAGATCCAAGTGCTGAAGTCATAGCTTTATCACCAAACACACTAATGGCCACAAACCGGTTCATATGTGAAATCTGCAACAAAGGGTTTCAAAGAGATCAAAACCTTCAGTTGCACCGGCGAGGCCACAACTTGCCATGGAAGCTTAAGCAGAGAACAAGCACAGAGGTTCGAAAGAGGGTTTATGTTTGTCCAGAACCCTCGTGTGTCCACCACAACCCTGCAAGAGCACTTGGTGACCTCACCGGCATTAAAAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAATGTGATAAGTGCTCAAAGAAATACGCTGTTCAGTCTGACTGGAAAGCCCACTCAAAAATCTGTGGTACAAGGGAATACAAATGTGACTGTGGTACCATTTTTTCGAGAAGAGACAGTTTCATTACACACAGAGCTTTCTGTGACGCACTGGCTGAAGAGAACAACAAAGCCAACGAAGGACAATTGCCAAAGATAGGTCCAAACTTGCAATGCCAACAGATTCCAAACCTTGTTTCCTCATTACCAATCAACACCAACATTGTTCCCAACCCACAAATCGGTGGCACATCGGAGTTCAACCATGCTGAACACAAGCACCCACTATCACTCCCACACGAGCTAATGCCAATGCCTGCACCAAAACCCTTCAACAACACCACCACCATGGCAGGAACAGTGTTCTCGAGAAGCCTCACATCAACCTCTCCACCGTCTCTCCAACTAAGTTCAAATATATTCGAGGAAAACGGGCTCCACCTGGCTGCAGGGTCGCCACACATGTCAGCCACGGCACTGCTGCAAAAAGCTGCGCAAATGGGAGCAACAGTGACGGAGAAAACTTTTAGCACAAACATGGCACCGCCATCGTTTGGGGTTCTGCAACAGCAGCCGAATGGACAATCCTTCATGAACCAGTACATGCAGAGTGGCCAACATGATGCTAACGTTAACATCTCGGCTCAGTATAATGGTTTCGGCGCAAATGGGATAAGTGGAGGAAGCGTTGGAATGAACGGTGTGGACATGTTCAACGCTATCTTGGACCAAAGCAAGGCTTTATCAAAGATCATAGAGCAAAGCAATAGAAGCAGTAGTGGAGGAGCAACAAATGGAGGTTCAAGTGCTATTAACGTTGGTGGAAGTAAAGGAAGTGGGGATGTAATGACTTTGGACTTTTTGGGAATAGGGGGTGGTGGTGGTGGTGGTGGCGGTGGCGGTGGTGGTGGTGCACATGGAAACTTCTATGGTGGTTCACAACAAGCAGAAAATGGTGCACCGGATGAGGTTTGGAGAAACTGGTCAAGTAAGAACGCAGGGTTTGAATCATTTTCAGCAACAAGTAGCATTTGA 1575 0.4641 MSNITSCDSGSFSTENTREDAAVKQKSEMLGQFHSPHSLTSTTTTNNSNGSNTNSQPPAPVKKKRSLPGNPDPSAEVIALSPNTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEVRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKANEGQLPKIGPNLQCQQIPNLVSSLPINTNIVPNPQIGGTSEFNHAEHKHPLSLPHELMPMPAPKPFNNTTTMAGTVFSRSLTSTSPPSLQLSSNIFEENGLHLAAGSPHMSATALLQKAAQMGATVTEKTFSTNMAPPSFGVLQQQPNGQSFMNQYMQSGQHDANVNISAQYNGFGANGISGGSVGMNGVDMFNAILDQSKALSKIIEQSNRSSSGGATNGGSSAINVGGSKGSGDVMTLDFLGIGGGGGGGGGGGGGGAHGNFYGGSQQAENGAPDEVWRNWSSKNAGFESFSATSSI* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03073 524 Gene3D Classic Zinc Finger 70 137 - -
Phac7g03073 524 SUPERFAMILY beta-beta-alpha zinc fingers 90 187 IPR036236 -
Phac7g03073 524 MobiDBLite consensus disorder prediction 486 511 - -
Phac7g03073 524 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 113 IPR013087 -
Phac7g03073 524 MobiDBLite consensus disorder prediction 31 60 - -
Phac7g03073 524 Gene3D Classic Zinc Finger 146 225 - -
Phac7g03073 524 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 42 490 IPR031140 -
Phac7g03073 524 MobiDBLite consensus disorder prediction 1 75 - -
Phac7g03073 524 MobiDBLite consensus disorder prediction 1 18 - -
Phac7g03073 524 FunFam protein indeterminate-domain 5, chloroplastic-like 145 224 - -
Phac7g03073 524 Pfam Zinc-finger double-stranded RNA-binding 91 113 IPR022755 -
Phac7g03073 524 SMART c2h2final6 167 187 IPR013087 -
Phac7g03073 524 SMART c2h2final6 132 162 IPR013087 -
Phac7g03073 524 SMART c2h2final6 91 113 IPR013087 -
Phac7g03073 524 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Phac7g03073 524 FunFam protein indeterminate-domain 12-like 70 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03073 Phac-Chr7 34014461 34018516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03073 48 349 IDZ Gene Family AT3G50700 57.187 2.71e-120 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g03073 zf-C2H2_jaz 7.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03073 - - gmx:100785295 895.575