Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03071 ATGGATCAGGAGGAGCAGGATAAAGCGTTGCCCATTGCAAATGTGGGTAGAATCATGAAGCAAATTCTTCCTCCTAGTGCAAAGATCTCCAAGGAAGGGAAACAACTAATGCAAGAGTGTGTGACAGAGTTCATAAGTTTTGTGACTGGTGAGGCATCTGACAAGTGTCACAAGGAGAATCGCAAGACCGTTAATGGGGATGACATCTGTTGGGCTCTAAGTTCCTTAGGGTTTGACAACTATGCTGAGACCATAGCAAGGTACTTACATAAATACAGGCAAGCTGAAAGGGAGAAAATGAATCACAACAAAAAATATGAAGGATCAGCAACACAAACTCTCAACCAACCTCAACTTATCCTTCCTCCTCCACCACCATCACTCTCTAGGGTTACTGACAAAGTTCAAAACCCTCCCACTACAGATCAATCTGGATGA 438 0.4338 MDQEEQDKALPIANVGRIMKQILPPSAKISKEGKQLMQECVTEFISFVTGEASDKCHKENRKTVNGDDICWALSSLGFDNYAETIARYLHKYRQAEREKMNHNKKYEGSATQTLNQPQLILPPPPPSLSRVTDKVQNPPTTDQSG* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03071 145 SUPERFAMILY Histone-fold 6 111 IPR009072 GO:0046982
Phac7g03071 145 MobiDBLite consensus disorder prediction 130 145 - -
Phac7g03071 145 Coils Coil 78 105 - -
Phac7g03071 145 MobiDBLite consensus disorder prediction 99 145 - -
Phac7g03071 145 FunFam Nuclear transcription factor Y subunit B-6 1 114 - -
Phac7g03071 145 ProSitePatterns NF-YB/HAP3 subunit signature. 40 56 IPR003956 GO:0005634|GO:0006355|GO:0043565
Phac7g03071 145 PRINTS CCAAT-binding transcription factor subunit A signature 37 55 - -
Phac7g03071 145 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Phac7g03071 145 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Phac7g03071 145 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 10 73 IPR003958 -
Phac7g03071 145 Gene3D Histone, subunit A 1 120 IPR009072 GO:0046982
Phac7g03071 145 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 3 106 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03071 Phac-Chr7 33965862 33968535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03071 5 134 CCAAT-HAP3 Transcription Factor Family AT1G09030 60.000 2.91e-56 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phac7g03071 CBFD_NFYB_HMF 3.6e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03071 K08065 - gmx:100815151 225.328