Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03066 ATGGCGGAAACCAAGTTGAAAGAAAGCATTGGCGAAGAAGAAGATAAAAAAGAAACAGAGGACCAAAGCTTCGAAGAGCTCGGCGTGGACGCTCGTCTCCTTCGCGCTTTACACAAGAAAGGGATTGCGAAACCCACTCCAATTCAGGGCGTCGCCATTCCACTCATTCTGGAAGGCAAGGACGTGGTTGCACGCGCCAAAACAGGTTCTGGAAAGACCTTAGCATATCTTCTCCCGTTGCTTCAGAAACTTTTTACCGTTAGGGCTGATCGGAAGAAGTTGGCGCCCAATGCTTTTGTTCTTGTCCCTACTCGCGAACTCAGTCAACAGGTGTATGCGGAAGTGTTGTCGCTGGTTGAGCTGTGCAGAGTTAAACTAAAAGTTGTGCAGCTGAATAGCAACATGCTTGCCAATGACTTGCGGGCAGCATTGGCTGGACCTCCTGATATTTTGATCTCCACTCCTACTTGCGTAGCGAAGTGTTTGTCCGGTGGCATACTTAAGGCGGAATCCATTAGCGAATCGCTTGAAACTCTTGTTCTTGATGAGGCAGATCTTCTACTGTCATATGGGTATGAAAAGGATATAAAAGCTTTTACACCTCATGTTCCCAGAAGTTGCCAGTGTCTTCTTATGTCTGCAACATCAAGTGCGGATGTTGACAAACTAAAGAAGTTGATTCTGCACAACCCATTTATTCTGACTTTGCCTGAAGTGGGAAATAACAAGGAAGAGATCATTCCTAAAAATGTTCAGCAGTTCTGGATTTCATGTTCTGCCAGTGATAAGTTACTTTACATCCTTGCTGTGTTGAAGTTGGGGTTGGTCCAAAAGAAAGTCCTGATATTCACTAATACCATAGACATGAGTTTCAGATTGAAACTATTCTTGGAAAAGTTTGGGATCAGATCTGCTGTTTTAAATCCTGAGTTGCCTCAGAATTCCCGTCTCCATATTCTGGAGGAATTCAATGCGGGCCTGTTTGATTATCTAATTGCAACAGATCTTAGTCAGTCAAAGGAAAAAGATGAACTGTCTAAGGAAAGTAATGCTGTATCACGGAAGTCTAGAAAACGTGCTAAATTAGATTCTGAATTCGGAGTTGTAAGGGGAATTGACTTTAAAAATGTATTCACGGTTATAAACTTTGATATGCCTCATAGTGTTGAGGGATATGTACATCGAATTGGACGTACAGGTAGAGCGTACAATTCTGGTGCTTCTGTCTCTCTGGTTTCTCCAGATGAGATGTATACTTTAGAAGAAATAAGATCTTTTGTTGGGGATGATGAAAACAAAGGCACAAGTTCTATTGCTGAGTTTCCCCTCCTCACCAAGAACGCAGTTGAATCTTTACGGTATAGGGCAGAGGTGATTTATTATTTCCTTTACTCTTGA 1398 0.4256 MAETKLKESIGEEEDKKETEDQSFEELGVDARLLRALHKKGIAKPTPIQGVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFTVRADRKKLAPNAFVLVPTRELSQQVYAEVLSLVELCRVKLKVVQLNSNMLANDLRAALAGPPDILISTPTCVAKCLSGGILKAESISESLETLVLDEADLLLSYGYEKDIKAFTPHVPRSCQCLLMSATSSADVDKLKKLILHNPFILTLPEVGNNKEEIIPKNVQQFWISCSASDKLLYILAVLKLGLVQKKVLIFTNTIDMSFRLKLFLEKFGIRSAVLNPELPQNSRLHILEEFNAGLFDYLIATDLSQSKEKDELSKESNAVSRKSRKRAKLDSEFGVVRGIDFKNVFTVINFDMPHSVEGYVHRIGRTGRAYNSGASVSLVSPDEMYTLEEIRSFVGDDENKGTSSIAEFPLLTKNAVESLRYRAEVIYYFLYS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03066 465 Pfam DEAD/DEAH box helicase 46 223 IPR011545 GO:0003676|GO:0005524
Phac7g03066 465 Gene3D - 238 442 IPR027417 -
Phac7g03066 465 SMART helicmild6 291 403 IPR001650 -
Phac7g03066 465 Gene3D - 1 236 IPR027417 -
Phac7g03066 465 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 269 449 IPR001650 -
Phac7g03066 465 CDD DEADc_DDX56 29 236 - -
Phac7g03066 465 PANTHER RNA HELICASE 12 423 - -
Phac7g03066 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 428 IPR027417 -
Phac7g03066 465 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 53 234 IPR014001 -
Phac7g03066 465 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 22 50 IPR014014 GO:0003724
Phac7g03066 465 Pfam Helicase conserved C-terminal domain 262 403 IPR001650 -
Phac7g03066 465 CDD SF2_C_DEAD 251 412 - -
Phac7g03066 465 MobiDBLite consensus disorder prediction 1 23 - -
Phac7g03066 465 SMART ultradead3 41 254 IPR014001 -
Phac7g03066 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 235 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03066 Phac-Chr7 33930135 33938578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03066 3 416 Eukaryotic Initiation Factors Gene Family AT3G13920 28.095 6.92e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03066 K14810 - gmx:100800749 766.533