Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03062 ATGGCACCAACAAGGAAATCTAGAAGTGTTAGTAAGCGGATTTCAAATTCAAGTGATGTTTCTCCTGAGAAAGATGGTGTTAATTCAAATAAAAACAAACATCGGAAGAAAAAGTTGACTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTAGAAGGATTTTATGAAGCATATAGAATGTATGGGAAAGACTGGAAGAAGGTGGCTGGTGTTGTACGAAATAGAACCACTGAAATGGTAGAAGCTCTTTACAATATGAATCGGGCATATCTCTCTCTGCCAGAGGGCACGGCTTCTGTTGTTGGCCTCATAGCAATGATGACTGATCACTACAATGTGCTGGAAGAGAGTGACAGTGAAAGGGAGAGCAGTGATGCACTAGGACCTCGGAAATTTATAAAACGAAAGCGGGAAAAAGTTCAGCTTAGTGTCTCTAAAGACCAGTCTCATTCAATTGCTTCCAGTGAAGGTTGCCTCTCTTTATTGAAGAAGAGACGCTTAGATGGTATCGTGCCTCATGCTGTTGGTAAAAGAACTCCTCGTGTCCCAGTTTCTTATTCTTATAAGAAAGATTACACAGAAAATTATGTTTCGCCTTATAGAAGAAGCCTGAAGTCAACTACTGATGCCAATGATGATGAAGTTGCACATGTTGTAGCTTTGGCCTTAACTGAGGCTGCACAAAGAGGAGGCTCTCCCCAAGTTTCTCAATCACCGCGTAGAAGAGTAGAGCAAAAACCCTCACCTGTACAGCGCTGGGAAAAGAAGCACCAAGTGTCAGAGACAGCTCGTGCCAAGTTACACAATCTTTCAGTGGATGAAGAGTTATTAGACGGTAGTATAGAAAGCAGGGGAGCTGACAATAGAGAATATGCAAGAGATAATAGTTCATTGATGGATATGGAAGGCACAGGCACAGTTGAAGTTCTTCAGAAGGGGGGGAAATTTTACAGAAAGAGAGAGAGAGTGAAAAATGTTGGAAACCATCAGCTTGATGATGGTGGGGAAGCATGTAGCGGTACTGAAGAAGGGCTTTGTTTTAGTTCACTAAAGGAAATGGTTGATAGTGAGGTTACTAATGAAAAGCTTGAAAAAATCTCTCCAAAAGGTGGGGGGAAACGAAACAAGAAACTCTTCTTTGGAGATGAAACCCCTGCCTTGAATGCGTTGCAAACTTTAGCAGATCTGTCTCTAATGATGCCAATATCTACAATAGATTCTGAATCATCCATCCAATTGAAGGGTGACAGAATTTCTGCTGATAAAGATAGTAAGTCTGCTTTACCTGAAGCAACATCAACAAGCCATAAGAGACATAAACTTAAACGCAGTGTAGTGCCTGAAATTGAGGTTTCAACCTCCAAAAAGTCCAAGCTTGGAAAGGAATCGGCAAAGGATACCAATGTGCTCTCTGAATCAAAAGAACAACTTCCTTTTGTTGATGCAACATGGAAAAGGAAGCGGAAGTCTATGGTTCCAAAGGTTGCAAATGCAAAGCTTGATTCTTTTCCAAGTGGTCCCTTGAAAGATGAGGCTTTAGATGATGAGAAAAAACCAGTGGCTAAAGGAAAACATGGTGATCAGGTTTTGATCCTACCAAAGCAATTGAAGACCGTTAAATCATCAGAGAGTTCTTTGTTTAGTGATCAGAAAGATTTGACAGCATCAATGGCAGAAACTCCACTTTTGAACGAAGTTAGTTTACCAACTAAACGAAGTAGACGGAAGATGAATTTACCGAGAACTTCCTTTGCTAAAGAAAAGTCTTCTGATTACATATTGAAAAGTCAACCTAACAAGCACTCTGCGGTGAAGGAGAAGCTTTCTAGTTGCTTGTCATCTGATATAGTTCGCAGATGGTTTATTTTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTGATGGAATACTTAAATCATGTTGGACTAGGGAATATCCCAAGGTTAACTCGCGTTGAGTGGAGTGTTGTAAGAGGTTCCCTTGGCAAACCCCGGCGGCTTTCTGAACATTTTCTTCATGATGAAAGGCAAAAACTTGCAGAGTATCGGGAATCAGTGAGAAAGCATTATGCTGAACTGCGGACTGGTATTAGGGATGGACTTCCAACTGATTTAGCTAGACCATTATGTGTTGGACAGAGAGTAATTGCTGTTCATCCAAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACCGTTGATTATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAGTTAGGTGTTGAGTTTGTAATGGACATTGATTGTATGCCTTTCAATCCATTAGATAATATGCCAGAAGCTCTGAGGAGGCATATTGATGACAGAAAAGGCTCGCCTATAGAGCCACATATTAATGGAACTTCAAATTTTGGCGGGTGCGAAAGTCATTCCTCACCGGTTAAGGCTATGGTTGCTACTGTCGATAACTTCTGTGCACAAGCAGGTTGTGTTCAACCATGCAAAGTTACACACCATCAAGCTAAGGAAGCTGATATACATGCACTTTCTGAACTAAAGCGTGCTCTAGATCGAAAGGAGACATTGTTGATGGAGCTTCGAAGTTCAAATAGCGACATATTGGAAAACCAGAATGGCATAGAATGCGTAAACGATTCTGAGGTTTTCAAGAAACATTACGCCATGGTACTGGTAGAGCTAAAGGAAGCCAGTGGGCAGGTTTCTGATGCTATGTTACAACTGAGGCAGCGCAATACCTACAGAGGAAACTCTCTGCCACCATGGATGAAGCCGCAAACAAGTTTCAATGTTCATGACGATCTTCCCAATATGTTGGATAGCTCTCTTACACAAGAGTTAGGGTCAACTGTTGTTCAAATTATTAAAGGATCCAGGTCAAGGTCACATGCAATGGTAGATGCAGCATTTAAGGCATTGTCTTTGACAAAGGAAGGTGAAGATGCTTTCGTGAAAATTGGGCAAGCATTGGATTGTATTAATCATCAACAGTTGGCCTCGAAGTCTAGGTTACCTCTGATTAGGTCTCAAGAGCAAGTGACTGCAAATGGCAGTTTTTATAATCATAATCATTCAACTTGCAGTGTATCAGAGTCTATACTTAATGATCCATCTGGTGCAAAACTGCATAATTATTCGGACAAATTTGATACTGAACTTCCGTCGGATCTTATCACTTCATGTGTTGCTACATTAATCATGATTCAGACATGTACTGAACGGCAATACCCTCCAGCTGATGTGGCTCAGATATTAGATTCTGCCGTTAGCAGCCTGCATCCATGCTGTCCTCAAAACCTTCCTATTTATAGAGAAATTCAAATGTGCATGGGAAGAATCAAAACACAGATTTTAGCTCTCATCCCTACTTGA 3375 0.4098 MAPTRKSRSVSKRISNSSDVSPEKDGVNSNKNKHRKKKLTDKLGSQWSKEELEGFYEAYRMYGKDWKKVAGVVRNRTTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSERESSDALGPRKFIKRKREKVQLSVSKDQSHSIASSEGCLSLLKKRRLDGIVPHAVGKRTPRVPVSYSYKKDYTENYVSPYRRSLKSTTDANDDEVAHVVALALTEAAQRGGSPQVSQSPRRRVEQKPSPVQRWEKKHQVSETARAKLHNLSVDEELLDGSIESRGADNREYARDNSSLMDMEGTGTVEVLQKGGKFYRKRERVKNVGNHQLDDGGEACSGTEEGLCFSSLKEMVDSEVTNEKLEKISPKGGGKRNKKLFFGDETPALNALQTLADLSLMMPISTIDSESSIQLKGDRISADKDSKSALPEATSTSHKRHKLKRSVVPEIEVSTSKKSKLGKESAKDTNVLSESKEQLPFVDATWKRKRKSMVPKVANAKLDSFPSGPLKDEALDDEKKPVAKGKHGDQVLILPKQLKTVKSSESSLFSDQKDLTASMAETPLLNEVSLPTKRSRRKMNLPRTSFAKEKSSDYILKSQPNKHSAVKEKLSSCLSSDIVRRWFIFEWFYSAIDYPWFAKRELMEYLNHVGLGNIPRLTRVEWSVVRGSLGKPRRLSEHFLHDERQKLAEYRESVRKHYAELRTGIRDGLPTDLARPLCVGQRVIAVHPKTREIHDGSVLTVDYDKCRIQFDRPELGVEFVMDIDCMPFNPLDNMPEALRRHIDDRKGSPIEPHINGTSNFGGCESHSSPVKAMVATVDNFCAQAGCVQPCKVTHHQAKEADIHALSELKRALDRKETLLMELRSSNSDILENQNGIECVNDSEVFKKHYAMVLVELKEASGQVSDAMLQLRQRNTYRGNSLPPWMKPQTSFNVHDDLPNMLDSSLTQELGSTVVQIIKGSRSRSHAMVDAAFKALSLTKEGEDAFVKIGQALDCINHQQLASKSRLPLIRSQEQVTANGSFYNHNHSTCSVSESILNDPSGAKLHNYSDKFDTELPSDLITSCVATLIMIQTCTERQYPPADVAQILDSAVSSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03062 1124 MobiDBLite consensus disorder prediction 1 42 - -
Phac7g03062 1124 MobiDBLite consensus disorder prediction 228 260 - -
Phac7g03062 1124 MobiDBLite consensus disorder prediction 246 260 - -
Phac7g03062 1124 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Phac7g03062 1124 PANTHER LIN-9 1 1124 IPR010561 GO:0006351|GO:0017053
Phac7g03062 1124 FunFam Protein ALWAYS EARLY 3 isoform A 3 99 - -
Phac7g03062 1124 SUPERFAMILY Homeodomain-like 41 90 IPR009057 -
Phac7g03062 1124 Coils Coil 844 864 - -
Phac7g03062 1124 SMART DIRP_2 627 728 IPR033471 -
Phac7g03062 1124 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Phac7g03062 1124 MobiDBLite consensus disorder prediction 230 245 - -
Phac7g03062 1124 MobiDBLite consensus disorder prediction 416 471 - -
Phac7g03062 1124 MobiDBLite consensus disorder prediction 455 470 - -
Phac7g03062 1124 SMART sant 43 91 IPR001005 -
Phac7g03062 1124 CDD SANT 47 81 IPR001005 -
Phac7g03062 1124 MobiDBLite consensus disorder prediction 1 25 - -
Phac7g03062 1124 Pfam DIRP 626 727 IPR033471 -
Phac7g03062 1124 Gene3D - 4 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03062 Phac-Chr7 33879508 33893082 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac7g03062 DIRP 3.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03062 - - gmx:100816217 1847.4