Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03024 ATGTGTTTGCCCGAGGGAGAGAGAGACAGAGAGAGAGCCATGGCACTGGAAGCAGTGGTGTTTCCACAATCACAAGACCCATTTGGATCAGTGAAGGACTTTTACAACTGCACCTTCTTGGCTGCTACTTCACCCAACTGGGGGGACTGTGAACACATCAACATCGACAAAGAAGAAGAACAAGGTTCCATCTCTACTTTTCTCGATAATAATAACAACCAACCAAACAATTACCCTTATGGAGGAGATTGGACCAGCTCCTCCTCCTCTATCTTACCCCACTTGAATGAACTTCAAGAAACCACAGACCCCAGTAGCAGCACTCAAAACTTGGATAGCTTAACCACTCGTCCCAAGAGGCGCAGAGCCAAAAGCAGAAAGAACAAGGAAGAAATTGAGAACCAAAGAATGACTCACATTGCTGTGGAGCGCAATAGAAGAAAGCAGATGAATGAGTATCTTTCTGTTCTTCGCTCTCTCATGCCAGACTCTTATATCCAAAGGGGTGATCAAGCTTCTATAATTGGAGGTGCTATTAACTTTGTCAAGGAGCTTGAGCAGAGGCTGCATTTTCTTGGTGCTCAGAAAGAAGGAGAGGGGAAATCTGATGCTGGTGGTGCAACAAACATGCCCTTTTCAGAGTTCTTCGCTTTTCCGCAGTATTCAACAAGTGGCGGTGGTGGCTCTGATAATTCTGCAACCATAGGTGAAGACGTGGGTGAAGTTAAGTATGGCATTGCTGACATAGAAGTGACCATGGTGGAAAGCCATGCAAATCTCAAAATAAGATCCAAGAAGCGCCCCAAGCAACTCTTGAAGTTGGTCTCTGGTTTGCATACTATGCGCCTCACAATCTTGCACCTAAATGTTACTACCACTGCTGAAGTTGTACTCTACACTCTAAGTGTTAAGGTAGAAGATGATTGCAAGTTGGGATCCGTTGATGATATAGCTGAAGCTGTGTACCAGACGCTGGATAGGATTCAGCAAGAGGCAGTGTTGAATTAA 1008 0.4504 MCLPEGERDRERAMALEAVVFPQSQDPFGSVKDFYNCTFLAATSPNWGDCEHINIDKEEEQGSISTFLDNNNNQPNNYPYGGDWTSSSSSILPHLNELQETTDPSSSTQNLDSLTTRPKRRRAKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKEGEGKSDAGGATNMPFSEFFAFPQYSTSGGGGSDNSATIGEDVGEVKYGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTTTAEVVLYTLSVKVEDDCKLGSVDDIAEAVYQTLDRIQQEAVLN* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03024 335 Gene3D - 119 199 IPR036638 GO:0046983
Phac7g03024 335 MobiDBLite consensus disorder prediction 98 131 - -
Phac7g03024 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 134 185 IPR011598 GO:0046983
Phac7g03024 335 MobiDBLite consensus disorder prediction 65 85 - -
Phac7g03024 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 197 IPR036638 GO:0046983
Phac7g03024 335 MobiDBLite consensus disorder prediction 98 114 - -
Phac7g03024 335 CDD bHLH_AtFAMA_like 137 209 - -
Phac7g03024 335 PANTHER MAX DIMERIZATION, MAD 84 332 - -
Phac7g03024 335 SMART finulus 140 191 IPR011598 GO:0046983
Phac7g03024 335 Pfam Helix-loop-helix DNA-binding domain 135 186 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03024 Phac-Chr7 33670855 33673595 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03024 14 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 49.032 1.16e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g03024 HLH 8.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03024 - - pvu:PHAVU_007G181900g 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g03024 7 33670855 33673595 Phac7g03024 7 33670855 33673595 ECH