LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac7g02959	ATGCCTCACTTTCATGATGATTCTCCGTGTTTCTTGCAGTACAATGAAATCCTTGGAAAAGGAGCTTCAAAGACAGTATATAGGGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAGCTGTATGATTTTCTGCAAAGTCCTGAAGATCTTGAGAGACTTTATTGTGAAATTCATCTCCTGAAAACGTTGAAACACAGGAACATTATGAAATTCTACACTTCTTGGGTTGATACTGCGAATAGGAATATCAACTTCGTGACCGAAATGTTCACCTCCGGTACACTTAGACAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGTAGACAGATCTTGAGTGGACTTCTCTATCTTCATAGTCACGATCCGCCAGTGATCCATAGAGATCTAAAATGTGATAACATTTTTGTCAATGGAAACCAAGGGGAAGTGAAGATTGGGGATCTTGGTTTGGCAGCAATTCTCCGAAAATCTCATGCAGCTCATTGTGTAGGGACGCCCGAGTTCATGGCCCCTGAAGTATATGAAGAGGCATATAATGAGCTAGTGGACATTTATTCCTTTGGGATGTGCATACTAGAGATGGTCACATTCGAATATCCTTATAGTGAATGTACTCATCCGGCTCAAATCTATAAGAAAGTTGTTTCTGGGAAAAAGCCAGATGCTTTGTATAGAGTGAAGGATCCGGAGGTGCGACAATTTGTTGAAAAATGCTTGGCCACGGTGTCTCTTAGGCTTTCTGCTAGGGAGCTTCTAGATGATTCATTTCTTCGAATTGATGATTATGAATATGATATAAGAACTGTAGAAAATGGTGAATTGGATGAATTTGGTCCTCTCATCAGACAGCCATTCTTTGATCTTCATCGAAGCTATAGTAACTTCAGTAATGAATACTCAAATGGCTTTGGGTATGAAGGAGACTGGTGTCCTCATCCGGCTGAGATTGAACCGAGTGGAATTGAACTTTTTGAGTACCATGATGAACCCTCTGAAGATGTTGACATAAGCATCAAGGGGAAGAGGAAAGATGATGGTGGCATCTTTTTGAGACTAAGAATTGCTGATAAAGAAGGTCGCATCCGGAATATTTATTTCCCATTTGACATAGAGATGGACACAGCAATAAGTGTGGCAACTGAAATGGTTGCAGAGCTCGACATTACTGATCAGGATGTTACCAGAATAGCTGATATGATTGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAGACCAGGACCAGGAATTGACGAAACTCCCCGTTTTGCAAATCAAGGTTTCTGTCACAACTGTGTGTCTAATCATACTTCTAGCGGCTCTTTTCTGGAGTTTCTCTCACACAATCCAGGTGAGAAGAACCTGCAACTTGAGTGTTGTAGGCATGGATGTGCTTCAATGCATGGACGGTTTGAGGAGATTACCTTCCAATCTGAAGAGTATGACAACCATGCTAGAGGGGATCTGAACATATCAAGCCAGTTAGACAGCTTACAGTATCAGGAGTTATGGAATCAGCACGAAAGTCGTGAACTGAGTCCAGTAGAATCTGATCAAAGCCATTCTGACGAACAATACGAACAATTAGATAAATCACTTCCAGCTAAGGATAAAGAACATTATGTTTGGGAAAGCAAGGTTTCACTCAATGCTGCAAATTCTCTTAGAAATTTATCAGGAAGTCATGACTTCTCTACCATCCGATCTGCCTATTGTGACCTAGAAGATGACTATGAGAAAGAGATCCAAAAAGAACTCAGATGGCTAAGAGCCAAGTACCAAATTGAATTAAGGGATCATAAGGACCGACAGTTTGAGCAATCTGCACACAGTACTAACAAAGAGCACAAAACAGAAAATGGCTTCTTGTCACCTTCACTGACAGAAACATTAAAAGAAGGCAACAATGGGACTCAGTTGAAACCCTTTACTAATAAGTGGCATTGTGGTTCCAGTAACCCTCATGGCCATGAAAGCAGCCCCAATTCGGACACCCCAAGGGACCAAAATTGTGAGGCGATGGAATCCCCTGACAAAGGTATGGTTACTGCAAAGAGTTTTTATACTGGCTCATTGCTTCCACACTCTCTGCACAGGACAGTTTCCCTCCCAGTTGATGCTGTTGATATATAA	2169	0.4154	MPHFHDDSPCFLQYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILSGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPDALYRVKDPEVRQFVEKCLATVSLRLSARELLDDSFLRIDDYEYDIRTVENGELDEFGPLIRQPFFDLHRSYSNFSNEYSNGFGYEGDWCPHPAEIEPSGIELFEYHDEPSEDVDISIKGKRKDDGGIFLRLRIADKEGRIRNIYFPFDIEMDTAISVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIDETPRFANQGFCHNCVSNHTSSGSFLEFLSHNPGEKNLQLECCRHGCASMHGRFEEITFQSEEYDNHARGDLNISSQLDSLQYQELWNQHESRELSPVESDQSHSDEQYEQLDKSLPAKDKEHYVWESKVSLNAANSLRNLSGSHDFSTIRSAYCDLEDDYEKEIQKELRWLRAKYQIELRDHKDRQFEQSAHSTNKEHKTENGFLSPSLTETLKEGNNGTQLKPFTNKWHCGSSNPHGHESSPNSDTPRDQNCEAMESPDKGMVTAKSFYTGSLLPHSLHRTVSLPVDAVDI*	723

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac7g02959	722	Gene3D	Transferase(Phosphotransferase) domain 1	95	274	-	-
	Phac7g02959	722	Gene3D	-	358	423	-	-
	Phac7g02959	722	Pfam	Oxidative-stress-responsive kinase 1 C-terminal domain	361	415	IPR024678	GO:0004674\|GO:0005524
	Phac7g02959	722	Gene3D	Phosphorylase Kinase; domain 1	4	93	-	-
	Phac7g02959	722	SUPERFAMILY	Protein kinase-like (PK-like)	15	270	IPR011009	-
	Phac7g02959	722	ProSiteProfiles	Protein kinase domain profile.	12	269	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g02959	722	FunFam	probable serine/threonine-protein kinase WNK9	95	274	-	-
	Phac7g02959	722	SMART	serkin_6	12	269	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac7g02959	722	MobiDBLite	consensus disorder prediction	630	682	-	-
	Phac7g02959	722	FunFam	probable serine/threonine-protein kinase WNK9	358	442	-	-
	Phac7g02959	722	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	9	630	-	-
	Phac7g02959	722	MobiDBLite	consensus disorder prediction	521	540	-	-
	Phac7g02959	722	MobiDBLite	consensus disorder prediction	616	686	-	-
	Phac7g02959	722	CDD	STKc_WNK	11	269	-	-
	Phac7g02959	722	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	136	148	IPR008271	GO:0004672\|GO:0006468
	Phac7g02959	722	FunFam	Probable serine/threonine-protein kinase WNK1	3	93	-	-
	Phac7g02959	722	Pfam	Protein kinase domain	14	269	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac7g02959	Phac-Chr7	33269282	33274164	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac7g02959	115	721	MAP Kinase Kinase Kinase	AT3G04910	53.538	0.0	610

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Phac7g02959		Pkinase	4.2e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac7g02959	K08867		-	gmx:100272198	1357.43