Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02933 ATGGCAGGTAATAGTAGCTCGGAGGGGTTAGGAGATGATTTCTTCGAACAGATCTTAGCAGTGCCTGAAGCTCCGGTGGGATATGGCAGAACCGTAGCCACTGACGTTGGAATGCTGCAATTAGGGTCCACAAATTCAACTGCCGCTGCTCTCAGAGGTGGTGGAATGATGCCTCTGGGCATGAATTTGGAGCAATCTGCTTTTCTAAGCCACCATGATTCCAGAAACTTAGTTGACGATGTTGTTAATGTTGATCCCAGCGTTCACAATAATCACCACCACCACCATCATCAACACCTCACTCTCCACAATAACAACTCATCACCCTCTTCTACTGCACCAATCACCGATCGCGATTCGATGCATGTGAGAGGTTTGTTTTCAGCGTTTGGACAGTTGCATAGTCCTACGCTTGTTCCCTCTGTCCGCCCCACGCTGTCATCGCCGCCGCCTCCTCAGCCCCAGCTCCACCTCCACCACCACCACCATAACCAACAGGCGTTTCAGGGCCAGGGAGGTGGAGGTCCAGCGTTAATGAGTTGTACCCCACAAGCACCTATCATTCGCCCTCGTGTGAGAGCAAGAAGAGGGCAAGCCACAGATCCACACAGTATTGCTGAACGGTTGCGTCGCGAAAGAATTGCTGAAAGAATGAAGGCATTGCAGGAGTTGGTTCCCAGCATTAATAAGACGGACAGAGCAGCGATGCTTGATGAAATTGTGGATTATGTGAAGTTCCTAAGGCTCCAGGTTAAGGTCCTGAGCATGAGTAGACTGGGGGGAGCTGGTGCAGTTGCTCAACTTGTGGCTGATGTTCCCCTTTCTGCAGTGGAGCAAGGGGAGGACATAGAAGGTGGCGCCAATGAGCAAGCCTGGGACAAGTGGTCCAATGACGGTACAGAACAACAAGTTGCTAAACTTATGGAAGAAGATGTGGGTGCGGCTATGCAATTTCTTCAGTCCAAGGCACTTTGTATCATGCCCATATCTCTAGCCTCAGCCATTTTTCGTATGCCTCAATCAGAATCATCAACAGTCATCAAGCCTGAATCAAACAGCCACTGA 1065 0.5014 MAGNSSSEGLGDDFFEQILAVPEAPVGYGRTVATDVGMLQLGSTNSTAAALRGGGMMPLGMNLEQSAFLSHHDSRNLVDDVVNVDPSVHNNHHHHHHQHLTLHNNNSSPSSTAPITDRDSMHVRGLFSAFGQLHSPTLVPSVRPTLSSPPPPQPQLHLHHHHHNQQAFQGQGGGGPALMSCTPQAPIIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSAVEQGEDIEGGANEQAWDKWSNDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRMPQSESSTVIKPESNSH* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02933 354 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 247 IPR011598 GO:0046983
Phac7g02933 354 MobiDBLite consensus disorder prediction 141 174 - -
Phac7g02933 354 Pfam Helix-loop-helix DNA-binding domain 203 247 IPR011598 GO:0046983
Phac7g02933 354 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 68 333 - -
Phac7g02933 354 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 257 IPR036638 GO:0046983
Phac7g02933 354 Gene3D - 193 255 IPR036638 GO:0046983
Phac7g02933 354 MobiDBLite consensus disorder prediction 86 117 - -
Phac7g02933 354 MobiDBLite consensus disorder prediction 102 117 - -
Phac7g02933 354 SMART finulus 204 253 IPR011598 GO:0046983
Phac7g02933 354 FunFam Basic helix-loop-helix transcription factor 193 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02933 Phac-Chr7 33052102 33056934 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02933 188 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.313 1.18e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g02933 HLH 3.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02933 - - vun:114189791 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02933 7 33052102 33056934 Phac7g02933 7 33052102 33056934 ECH