Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02927 ATGACACACAAGCACACGCACGGCACAAGAAGCGTTGGTTTGTTAGTAGTGTGTGTATGGCGTGTGTATTGCTTTGCTTCTCCTTCTCTTTCTCTTCATGCTCTCTTTTCTTTGTCTCGCTCTAACACCAACAACACCCAAAACCAACAACGACAACAACATTGGACGGTGCCCGGTTCATCTTTACGTAGTTTTTGTGCCAACAATCGAACCCCATCTGGGGATTTGGCCCCCAAAAGCCGCCACTTGAATTCCCTGCCCAGATCCATATCGGTTCCACGTCGAATCCAACAGGGACAAAACCACCGTGGTGTGCTGTGGTTTACTTGTCAGGATTGGAATGCAAAGTTAATTAATTTATTCGTTATCGTAGCGATGGTGTCGAGCCAGGTAGTGAAAGTGAAGAGAAATACGCTACGACCATGCATGACATGCCCTCTCTGCCATAACTTATACAAAGATGCCACCACCATCTCTCTCTGCCTTCACACCTTTTGCAGGAAGTGCATATATGATAAACTATCGGATGAGGAGATGGATTGCTGTCCTGTGTGCAACATTGATTTAGGCTGCCTTCCGGTGGAAAAGCTCAGGCCAGACCATAATTTGCAAGATATAAGAGCAAAAATTTTCCCGTTTAGAAGAAAAAAGATCAAGGCCCAGGAACCTTTGTCTTCAATATCATTGCCAACTAAAAGGAAGGAAAGATCACTTTCATCATTGGTAGTCAGTGCTCCCAAAGTTTCAATGCAGCCCGGCTTTACAGGAAAGAGAACTAAAACCAGTACAAGAAAGGCTGCTGCTTTACGTGGATGCAGTTTTCTTCTTGAAGAATCCATAAAGAAGGAAGAAACAAATGGTGAAGATAATACGGATTCTTTCATGGCTGAGCCTTCTAAAAAGCATAAGCCTAATGAAGATAAAGAAAACAGTGTGGAACATGCAGAAGGGAAGGTTGATCTCTGGACACCACTGAACTGTCTTGTTGAAGCTGCCAACAGAACAAAGTCCTCCAGGTCAAATTCACAAGCAAATGCTGTTGCCAAATTAGAGTCCCTAGTTACTCCTCATGGTGGACAAAATATACCTGAAATTACAACCAAAACAGACCTACCTGCTTCTGTCCAGAGTGAACTAAACATTCCAAAATCCAAAAATAAGGATACTGGACATAAAACAATATTTGGGGACGACAAGGATGCAAACAGTTTGCCTTCAGGACCAGTGAAGAGAAGAAGGTTGCGTCCTGCTGGTCAGAAAAGAGTTGCAGCATCTGAGATGTCTGCCTCATCCCCAGCTCCACTAAATGCAACAGGGAGCAAAAGCAATAGAAAAAACAGTCCTATTTGGTTTTCATTGGTTGCTTCAGAAGACCAGAAAGGAGATGTTCCCTTGCCACAGGTCTCAGCATGTTATTTAAGAATAAAGGATGGTACTGTGCCCGTCTCATTTATTCAAAAGTACCTTGTGAAGAAACTTAATCTTTCCAGTGAAGCAGAGGTGGAAATAATGTGCCGGGGTCAGGCAGTGCTCCCATCATTACAACTGCATAATTTAGTAGAGCTATGGTTCCGGACAGCCTCAACCTCGAAGAGGATACCAGCATCAGTGGGGTCCTCAGCCAAAGATTTTGTGATGGTTTTATCCTATTGTCGAAAGGCCTTGCCCTCTTGA 1674 0.4379 MTHKHTHGTRSVGLLVVCVWRVYCFASPSLSLHALFSLSRSNTNNTQNQQRQQHWTVPGSSLRSFCANNRTPSGDLAPKSRHLNSLPRSISVPRRIQQGQNHRGVLWFTCQDWNAKLINLFVIVAMVSSQVVKVKRNTLRPCMTCPLCHNLYKDATTISLCLHTFCRKCIYDKLSDEEMDCCPVCNIDLGCLPVEKLRPDHNLQDIRAKIFPFRRKKIKAQEPLSSISLPTKRKERSLSSLVVSAPKVSMQPGFTGKRTKTSTRKAAALRGCSFLLEESIKKEETNGEDNTDSFMAEPSKKHKPNEDKENSVEHAEGKVDLWTPLNCLVEAANRTKSSRSNSQANAVAKLESLVTPHGGQNIPEITTKTDLPASVQSELNIPKSKNKDTGHKTIFGDDKDANSLPSGPVKRRRLRPAGQKRVAASEMSASSPAPLNATGSKSNRKNSPIWFSLVASEDQKGDVPLPQVSACYLRIKDGTVPVSFIQKYLVKKLNLSSEAEVEIMCRGQAVLPSLQLHNLVELWFRTASTSKRIPASVGSSAKDFVMVLSYCRKALPS* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02927 557 MobiDBLite consensus disorder prediction 352 443 - -
Phac7g02927 557 Gene3D - 435 531 - -
Phac7g02927 557 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 130 555 IPR044807 GO:0004842
Phac7g02927 557 MobiDBLite consensus disorder prediction 384 398 - -
Phac7g02927 557 MobiDBLite consensus disorder prediction 424 443 - -
Phac7g02927 557 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Phac7g02927 557 ProSiteProfiles Zinc finger RING-type profile. 145 186 IPR001841 -
Phac7g02927 557 MobiDBLite consensus disorder prediction 280 316 - -
Phac7g02927 557 CDD RING-HC_PCGF 143 186 - -
Phac7g02927 557 Pfam Zinc finger, C3HC4 type (RING finger) 145 185 - -
Phac7g02927 557 SMART ring_2 145 185 IPR001841 -
Phac7g02927 557 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 236 IPR013083 -
Phac7g02927 557 MobiDBLite consensus disorder prediction 359 383 - -
Phac7g02927 557 SUPERFAMILY RING/U-box 139 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02927 Phac-Chr7 32979919 32985352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02927 126 476 C3H Transcription Factor Family AT2G30580 42.432 1.44e-80 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02927 K16277 - gmx:100783999 777.704