Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02921 ATGTCTACCGCCGCGCAAACCAGAGTCAAGAAAACAGCGGCCACCAAGAAGCCCCTCTCCCACCCTACCTTCGCCGTGATGATAGTGGAGGCCATTGCGAGTCTGAAGGAGAGAACTGGCTCCAGCCAATATGCGATAACGAAATTCATTGAAGGGAAGCACAAGGAGTTGCCTCCTACCTACAAGAAACTTGTTCTCCTTCATCTCAAGAAGTCTGTTGCTGCTGGCAAGCTTGTCAAGGTCAAAAACTCCTTCAAACTTGCACCCACCAAATCTGCCCCGGTTAAGGCTGCAATCGCTGTTCCTAAAAAGCCTAAGTCTGTTGTCAAGCCCACTGCCAAGGCCGCCACCAAGTCCAAGGCTGCTCCTAAGAAGAAGGCTGTGGCTAAGCCCAAGGCTAAGACAGCCGCCGCACCTGCCAAGCCTGCTAAGGCAGCAGCCAAGAAGGTTGTTGCCAAGTCCACCAAGAAGACTCCTGTAAAGGCCGTCAAGAAGTCTAAGACTGTGGTAAAGAAACCCAAGAGTGTGAAATCTCCGGCCAAGAAGGCCAAGAAGTAA 558 0.5179 MSTAAQTRVKKTAATKKPLSHPTFAVMIVEAIASLKERTGSSQYAITKFIEGKHKELPPTYKKLVLLHLKKSVAAGKLVKVKNSFKLAPTKSAPVKAAIAVPKKPKSVVKPTAKAATKSKAAPKKKAVAKPKAKTAAAPAKPAKAAAKKVVAKSTKKTPVKAVKKSKTVVKKPKSVKSPAKKAKK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02921 185 PANTHER HISTONE H1 7 179 - -
Phac7g02921 185 MobiDBLite consensus disorder prediction 150 185 - -
Phac7g02921 185 SUPERFAMILY "Winged helix" DNA-binding domain 17 98 IPR036390 -
Phac7g02921 185 MobiDBLite consensus disorder prediction 110 185 - -
Phac7g02921 185 SMART h15plus2 18 84 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac7g02921 185 PRINTS Histone H5 signature 113 127 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac7g02921 185 PRINTS Histone H5 signature 171 185 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac7g02921 185 PRINTS Histone H5 signature 34 51 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac7g02921 185 PRINTS Histone H5 signature 149 166 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac7g02921 185 PRINTS Histone H5 signature 7 28 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Phac7g02921 185 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 20 89 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac7g02921 185 Pfam linker histone H1 and H5 family 21 88 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac7g02921 185 CDD H15 20 98 IPR005818 GO:0000786|GO:0003677|GO:0006334
Phac7g02921 185 Gene3D - 15 101 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02921 Phac-Chr7 32944305 32945386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02921 22 103 Single Myb Histone (SMH) Gene Family AT1G72740 32.927 1.33e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02921 K11275 - gmx:100810590 159.844