Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02904 ATGTCAACTGTGTCTAAAGATGACAACTTGGTGCTGTCTTCGGAGGACTCTTCTTGCCCAGAAGAGTCTGAGATCGAATTGGGTCTTGGGTTGAGCATCTCTGGCCCTTCTAAGTCTCACCACCATGTCCATGCTCATGCTCCTTCTCCTTATGCTAGGATTTTCACTGCCAAGGCTTTTCCTTCTTCAGCAACACCATCACCTTCCTCTTCTTCCTCTTCTTCTCCCAACATCACTGCTGGCACCAAGAGAGCTGCTGAATCTCTTGTTGCAAATAATCGTCCCAGTCAAGTAGTTGGATGGCCTCCACTTCGGACATATAGAGTGAATAGCTGCAATATCCATGCAAAATCAACAGAAGTATTCGACTCAGTGACTGAGAAGAGTAAGGGCAATAATACTGTGGTAAGGAAGAGTGCTGACAATGGCAATGATTATAACATTAATGCCAAAGAAAAAAGACAGCTCAGGAGTTCCTTGTTCGTCAAGGTAAATATGGATGGGATACCTATTGGGAGGAAGGTTGATTTGAGCGCTCATAGTTCCTATGAAACCTTAGCACAAACGTTGGAGGATATGTTTAACGAATCAACTACAGTCACTACTTGCAAAGGAGCAAATGGTGAGGATCATGGAATTATTATTGGAGGAGAAATGCATTCAAAATTGTTGGATGGATCTTCCAAGTTTGTGCTCACTTACGAAGACAAGGAAGGAGATTGGATGCTTGTTGGAGATGTTCCTTGGGGGATGTTCCTCAGCTCGGTGAGGAGGCTAAGAATAATGAGGACATCTGAGGCTAATGGACTTGCACCAAGATTAGAAGAAAACATCAGACAGAAATGCAAACCCATATAG 858 0.4359 MSTVSKDDNLVLSSEDSSCPEESEIELGLGLSISGPSKSHHHVHAHAPSPYARIFTAKAFPSSATPSPSSSSSSSPNITAGTKRAAESLVANNRPSQVVGWPPLRTYRVNSCNIHAKSTEVFDSVTEKSKGNNTVVRKSADNGNDYNINAKEKRQLRSSLFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVTTCKGANGEDHGIIIGGEMHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPRLEENIRQKCKPI* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02904 285 MobiDBLite consensus disorder prediction 62 91 - -
Phac7g02904 285 Pfam AUX/IAA family 56 273 IPR033389 -
Phac7g02904 285 Gene3D - 154 276 - -
Phac7g02904 285 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 24 269 IPR003311 GO:0005634|GO:0006355
Phac7g02904 285 MobiDBLite consensus disorder prediction 1 18 - -
Phac7g02904 285 ProSiteProfiles PB1 domain profile. 159 266 IPR000270 GO:0005515
Phac7g02904 285 MobiDBLite consensus disorder prediction 1 46 - -
Phac7g02904 285 MobiDBLite consensus disorder prediction 62 82 - -
Phac7g02904 285 SUPERFAMILY CAD & PB1 domains 154 262 - -
Phac7g02904 285 FunFam Auxin-responsive protein 154 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02904 Phac-Chr7 32819612 32824914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02904 152 283 B3 DNA Binding Superfamily AT1G59750 34.328 1.17e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Phac7g02904 AUX_IAA 8.3e-62 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02904 K14484 - gmx:100779400 454.907