Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02900 ATGGCACCCAATAAAAGAGTGGTAGCGGCCTATCGTGCAATGGGAAGTCTTGGAATTGATGAATCGAAAGTGAAATCAGCGTTAAAGAAACTCCTGAAAGTGTTTGATAAAAACTGGGAACTTATCGAGGCAGAGAACTATAGAGTTCTAGCAGATGCTATATTTGAAGAGGACGATAATATGGTGCCCAAAGTGAAAAAGAAAATCCAGTCTGACGATGTACGCAGCACCTGTCATTCTTTGCCTTCCTTTTCAAATAACCAGGAAGATGAGACAGAGAGTGAAGAGGCTCAAATGCATATTGAAAGAGTACAACCTTTAAAAAGGCTGCGATTAAGAGGCCAAGAGAGTCAGCCTTTGCATCCTCTGACTAACAGTGCCACCAGCCCTCCTTCAAAAAGGCCTAAATTAGAAGATAATGCATTACACCAGGGTTCTTCTGGGAAGAAACCTCAAAACAAACCAGAGTCATTTGATGGGAACCCAAGGATTGAAGCACCGTCACTTCGACTACCAGATGACATTGTTGACAAGGGAAAGCAGCCTGCATCAACCCAAGTTTTGCAAAGAGGAAGAAAACTTACATCTGGAAGATCGTCCCCATCCACACCATCTAAAGAACCAACAGTTGAAGCAGGGAAGTTTCTGTTGCCAAACAACATGATGCCTCGTACTCAGGCACTCATCACACCCAAGGATGAGCCTATTGATGAAGTGCCTGATTATGAAATGCCCATTGCAGTGATTCCTCCTGAACCATCAAGCGTAAGGGACTCGTCCGTGAAGAATGGTGTAGCTGGAAAGCATGTTAGCCATGTTACTGTTACATCATCAGAATGCAGAGATGGAGTCAGAGATGAAGATGCTAGTCCTACCTCAAATGAAGAAGCCACTTGTAATGTAGAGATAGCCTCATCAACTCTTGGAGAGGTAAAACTATCTTTGAGCTGCAGCTCAGCACTTTGGGGATCAAAATTTCACATGCCTAGACGAGATGAAATTATAGAAATGATGGAGGAGAAATGCCTGTTTTCATATAAAATCGCCGACCCAAATTTCTCTGTTATGAAACTGTTGAGGGATCTATGCGATTGCATGTTGGAATTCAGAAACAATTCTAATAATGATCCAGAAGAAGGTTCTATACTAAGATCTAATGTTGATGTGTCGAAGGAATCACAGGAACCTGGCACACTGGATGTGGTAAGAAACAAAGATTTGGATATGCTTTCTGATGTTTCAAATGGACCCATCAATGTTAGTCCTTCTGCTGCAGTGGCTTCTCCCCGAAGTTTCCTTCTTCTTACTGACCTGAATGGTGTGCATGATGCTGTCTTAGATTCCAAGATGGACCAAACAACAAATGACTTTTCACAATGTAATGTCAGGAAGGAGGTGGAATGTCCTATCTCTCCCAATTCACATAGTTTAGTGATTGTTCCACAGGATCAGCTAACAGCTGATGATATAAGGTCTTTTTATGATATTAGTAGTGACCTTACAAAAGGAGAAGAAAATGTTGAAATTCCTTGGGTGAATGAATATACTAATGATTTCCCACCATCTTTTAACTACATACCCCAAAACCTTGTGTTCCAAGATGCTTATGTTAACATTTCTCTATCACGTGTTGGCAGTGAGGACTGTTGTTCAACTTGTGCGGGAAATTGTGTCTTGTCCATACCCTGTGCTTGTGCAAATAAAACTGGTGGTGAATTTGCATATGGTTCTCGAGGCCTACTGAAGGAACAATTCTTGGAAAGTTGCATTGCCATTAGTCGCAATCCTCAAAAACATTTCTTTTATTGCAAAAATTGTCCACTTGATAGAATTAAGAATGATGGTGGTTTAGAACCTTGTAAAGGACACTTAAAAAGGAAGTTTATTAAAGAATGCTGGAGCAAATGTGGCTGTGGGAAACAGTGTGGAAATCGGGTTATCCAGCGAGGAATGACTTGCAAATTGCAGGTGTTTTTCACTTCAGAAGGTAAAGGATGGGGTCTTCGTACCTTAGAGGACCTGCCTAAAGGTGCATTTGTATGTGAGTTTGTTGGAGAAATTTTATCCATTAAAGAGTTGTACGAGAGGAACATGAAATGCACTGGAGAAGGGAAACATACATACCCAGTACTACTGGATGCAAATTGGGATTCAGGACATGTGAATAACAAAGAAGCTCTATGCTTGGATGCAGCTTCGTTTGGCAATATTGCTAGGTTCATCAATCACAGATGTTTTGATGCAAACTTGGTTGAGATCCCAGTTGAAGTTGAGGATCCTGGCCATTATTACTATCATTTTGCTTTTTTCACTTCTAGAAAAATATCAGCACATGAGGAGCTAACATGGGATTATGGCATTGACTTTGATAATCATGATCATCCTATCAAGCTGTTCCACTGCAGTTGTGGCAGTAAATTCTGCAGGCATATGAAGAGGTCAAACAGATCTAACATATCTGCGTCAATTTCCGGATGA 2478 0.41 MAPNKRVVAAYRAMGSLGIDESKVKSALKKLLKVFDKNWELIEAENYRVLADAIFEEDDNMVPKVKKKIQSDDVRSTCHSLPSFSNNQEDETESEEAQMHIERVQPLKRLRLRGQESQPLHPLTNSATSPPSKRPKLEDNALHQGSSGKKPQNKPESFDGNPRIEAPSLRLPDDIVDKGKQPASTQVLQRGRKLTSGRSSPSTPSKEPTVEAGKFLLPNNMMPRTQALITPKDEPIDEVPDYEMPIAVIPPEPSSVRDSSVKNGVAGKHVSHVTVTSSECRDGVRDEDASPTSNEEATCNVEIASSTLGEVKLSLSCSSALWGSKFHMPRRDEIIEMMEEKCLFSYKIADPNFSVMKLLRDLCDCMLEFRNNSNNDPEEGSILRSNVDVSKESQEPGTLDVVRNKDLDMLSDVSNGPINVSPSAAVASPRSFLLLTDLNGVHDAVLDSKMDQTTNDFSQCNVRKEVECPISPNSHSLVIVPQDQLTADDIRSFYDISSDLTKGEENVEIPWVNEYTNDFPPSFNYIPQNLVFQDAYVNISLSRVGSEDCCSTCAGNCVLSIPCACANKTGGEFAYGSRGLLKEQFLESCIAISRNPQKHFFYCKNCPLDRIKNDGGLEPCKGHLKRKFIKECWSKCGCGKQCGNRVIQRGMTCKLQVFFTSEGKGWGLRTLEDLPKGAFVCEFVGEILSIKELYERNMKCTGEGKHTYPVLLDANWDSGHVNNKEALCLDAASFGNIARFINHRCFDANLVEIPVEVEDPGHYYYHFAFFTSRKISAHEELTWDYGIDFDNHDHPIKLFHCSCGSKFCRHMKRSNRSNISASISG* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02900 825 Pfam Pre-SET motif 501 645 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac7g02900 825 Pfam Ubiquitin-binding WIYLD domain 4 60 IPR018848 -
Phac7g02900 825 SMART preset_2 497 637 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac7g02900 825 ProSiteProfiles Pre-SET domain profile. 549 650 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Phac7g02900 825 Pfam SET domain 665 786 IPR001214 GO:0005515
Phac7g02900 825 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 819 - -
Phac7g02900 825 FunFam SET-domain containing protein lysine methyltransferase family protein 500 811 - -
Phac7g02900 825 ProSiteProfiles SET domain profile. 653 786 IPR001214 GO:0005515
Phac7g02900 825 SMART set_7 653 792 IPR001214 GO:0005515
Phac7g02900 825 Gene3D - 1 60 IPR043017 -
Phac7g02900 825 MobiDBLite consensus disorder prediction 182 207 - -
Phac7g02900 825 MobiDBLite consensus disorder prediction 115 212 - -
Phac7g02900 825 MobiDBLite consensus disorder prediction 118 133 - -
Phac7g02900 825 MobiDBLite consensus disorder prediction 70 98 - -
Phac7g02900 825 CDD SET_SETDB-like 521 786 - -
Phac7g02900 825 Gene3D SET domain 483 796 IPR046341 -
Phac7g02900 825 MobiDBLite consensus disorder prediction 277 297 - -
Phac7g02900 825 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 824 IPR025776 -
Phac7g02900 825 SUPERFAMILY SET domain 494 794 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02900 Phac-Chr7 32780645 32790481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02900 629 811 C2H2 Transcription Factor Family AT2G23740 40.212 1.91e-28 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phac7g02900 Pre-SET 1.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02900 - - vun:114190802 1429.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02900 7 32780645 32790481 Phac7g02900 7 32780645 32790481 ECH
Phac7g02900 7 32780645 32790481 Phac1g02360 1 33340641 33346524 PCT