Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02893 ATGGTCATGAATGCAGCCTCAGCCACTGGCTCTCACTCCCGAAATGGATTCCGTTTCTCGGACCAGCAAAATGGAGACTACAATCAACACAACGATGGTCAAGCATTCTCTGTCGCCGGAAGTGAGGATTTTGAAGCGCAGAAAGCATTCTACAGCAATGAAGAGAAACGGAAAGATAAGAGAAGTTTAATGAGCAATGATCAAGAAGATGAAAATCTTTTGGCTGAGGCAAGGCAACCAATGTGGCGCAAGGTTCCAATAGCTTCAAGCCTAATCAACCCATATCGCATAGTCATACTCTTGCGTCTCGTTATTTTAGTTTTCTTCTTCCACTTGCGCATCACAACTCCAGTGCATGATGCTCTTGCCTTATGGATAATCTCTGTAGTCTGTGAAATCTGGCTTGCATTATCTTGGATAGTTGACCAACTTCCCAAGTGGTTTCCTGTTACTCGTGAAACTTACCTTGAACGTTTGTCCTTAAGGTTTGAGCGTGAAGAGGAGCCAAACCTTCTAGCCCCGGTTGATATCTTTGTAACCACTGCGGACCCTTTTAAGGAACCACCTATTATAACCGCAAATACGGTTTTATCAGTCTTGTCTGTTGATTACCCTGTTGAGAAGGTTACCTGCTATGTCTCAGATGACAGTGCTTCAATGCTTCTCTTTGATACCTTGTCAGAAACTGCTGAATTTGCTAGAATATGGGTTCCTTTTTGTAAAAAGTATAACATTGAGACAAGGGCACCTGAGTTTTATTTCTCTGAGAAACTTGATTACTTGAAAGATAAGGTGCACCCCACATTTGTTAAGGATCGCAGGGCTATGAAGAGAGAGTACGAAGAATTCAAGGTGAAAATTAATGTACTGGTTGCAAAGGCTCTGAAAAAACCAGAAGAAGGGTGGGTGATGCAAGATGGAAACCCATGGCCTGGGAGCAACATGGATGATCATCCAGGAATAATTCAGGTACGTCTAGGAAGTACTGGTGCACTGGACAAGGAAGGCAAGGAACTGCCACGGCTTGTGTATGTTTCCAGGGAAAAACGTCCTGGATATCAACACCACAGAAAAGCTGGTGCCATGAATACTCTGGTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGCATTAAATCTGGATTGTGACCAATACATCAATAATAGCAAGGTTCTTAGGGAGTCTATGTGCTTTTTAATGGACCCCCAACTCGGAAAGAAGTTCTGTTATGTCCAATTTCCAAAAAGGTTTGATGGCATCGATTGCAATGACAGATATGCTAATCATAATACTGTGTTCTTTGATATCAACATGAAATGCCTTGATGGGATTCAAGGTCCTCTTTATGTTGGTACTGGATGTGTGTTCAACAGGCAAGCATTATATGGCTTTGATCCACTTTCTGATAAAAGGCCAAAGATGAAGAGTTGTTGCTGGCCTTCATCTTGCAGCTGTTGTTCCAGTGACTCTGAGTCTTCATCTGATGACGAGTCAGATCAAGAGCTTGTAGACTTTGATGACGAAGAGGAAGAGGAATTATCCTTCATGTCCCTGAAAAGTTTAGAGAAACGATTTGGACAATCACCGGTTTTCATTGCTTCAGTTTTAATGGAAGATGGTGGACTTCCCAAAGGCACAAACACCCGAGTGCTGATTAAGGAAGCAATTCATGTTATAAGCTGTGACTATGAAGAGAAAACTGAATGGGGAAAAGAGATTGGGTGGCTATATGGCTCAGTCACAGAAGACATCTTAACTGGGTTTAACATGCATTGCAGAGGATGGAAATCAGTGTACTGCATGCCAAAGAAAGCAGCTTTTAAGGGATCTGCTCCTATAAATCTATCAGATCGATTACACCAAGTTCTGAAATGGGCTTCGGGTTCTACTGAGATTTTCTTTAGTGGCTATTGCCCTTTGTGGTACGGCTATAGTGGAAAGTTGAAATGGCTACAGAGGTTGGCTTACACTAATTCCATCGTTTATCCATTCACTTCCATCCCCCTGCTGATCTACTGTACAATTCCAGCTGTCTGTCTTCTGACTGGAAAGTTCATCGTCCCTACTCTGTCAAACCTTGCTAGCATTTGGTTAATGGCCTTGTTTATCTCCATTATCTTAACATGCGTGCTAGAGCTTCGTTGGAGTGGGGTTAGCATTCAGGACTGGTGGCGCAATGAGCAATTCTGGGTCATTGGGGGTGTATCTGCACATCTTTTTGCTGTATTTCAAGGACTTCTTAAAGTTGGTGGAGTACACACTAATTTCTCTGTGAGAGCAAAATCAGCACATGACACTTCATTTGGACAGTTCTATCTCTTCAAGTGGACTGCTCTACTTATCCCACCAACAAGTCTTGTGATCTTAAATATGGTGGGAATTGTGGCTGGAATCTCTGATGCCATTAACAATGGCTATGACTCATGGGGACCTTTCTTTGGGAAGCTTTTCTTCTCCTTGTGGGTCATTGTGCACTTGTATCCTTTCCTCAAAGGGCTAATGGGAAAGCAAAACAGAACCCCTACCATTGTAATCCTCTGGTCAATACTTGTAGCCATGATCTTTTCAATGATTTGGGTGCGAATTGATATTTTCTTGCCCAAGCAGACAGGTCCAGCACTCAGACAGTGTGGGATAAGATGCTAA 2649 0.4273 MVMNAASATGSHSRNGFRFSDQQNGDYNQHNDGQAFSVAGSEDFEAQKAFYSNEEKRKDKRSLMSNDQEDENLLAEARQPMWRKVPIASSLINPYRIVILLRLVILVFFFHLRITTPVHDALALWIISVVCEIWLALSWIVDQLPKWFPVTRETYLERLSLRFEREEEPNLLAPVDIFVTTADPFKEPPIITANTVLSVLSVDYPVEKVTCYVSDDSASMLLFDTLSETAEFARIWVPFCKKYNIETRAPEFYFSEKLDYLKDKVHPTFVKDRRAMKREYEEFKVKINVLVAKALKKPEEGWVMQDGNPWPGSNMDDHPGIIQVRLGSTGALDKEGKELPRLVYVSREKRPGYQHHRKAGAMNTLVRVSAVLSNAPFALNLDCDQYINNSKVLRESMCFLMDPQLGKKFCYVQFPKRFDGIDCNDRYANHNTVFFDINMKCLDGIQGPLYVGTGCVFNRQALYGFDPLSDKRPKMKSCCWPSSCSCCSSDSESSSDDESDQELVDFDDEEEEELSFMSLKSLEKRFGQSPVFIASVLMEDGGLPKGTNTRVLIKEAIHVISCDYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKKAAFKGSAPINLSDRLHQVLKWASGSTEIFFSGYCPLWYGYSGKLKWLQRLAYTNSIVYPFTSIPLLIYCTIPAVCLLTGKFIVPTLSNLASIWLMALFISIILTCVLELRWSGVSIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVGGVHTNFSVRAKSAHDTSFGQFYLFKWTALLIPPTSLVILNMVGIVAGISDAINNGYDSWGPFFGKLFFSLWVIVHLYPFLKGLMGKQNRTPTIVILWSILVAMIFSMIWVRIDIFLPKQTGPALRQCGIRC* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02893 882 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 281 470 IPR029044 -
Phac7g02893 882 FunFam Cellulose synthase 292 466 - -
Phac7g02893 882 Pfam Cellulose synthase 175 875 IPR005150 GO:0016020|GO:0016760|GO:0030244
Phac7g02893 882 SUPERFAMILY Nucleotide-diphospho-sugar transferases 186 700 IPR029044 -
Phac7g02893 882 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 78 849 - -
Phac7g02893 882 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02893 Phac-Chr7 32723009 32730171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02893 66 882 Cell Wall Biosynthesis AT5G17420 69.062 0.0 1224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02893 K10999 - gmx:100777278 1559.66