Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02891 ATGAAGTGTCTACGGTCAGGAGAGTCGTTTGGAGGAGCTGATGAAGTGTTTCCTTCATCTGGGTCTCTTGCAAGTGCAACCAAGGACTTTTCAGCTAGTGAACACTCTTGCTTAGCTGAACACATTGATAAGAAGCAGGACACTGGGAACATAGAAGAAGCTGAATCATCCTTACGTGAGAGTGGTGTCTTGAACTATGAGGAAGCTAGAGCTTTGCTAGGAAGATATGAATATCAGAAAGGAAATATAGTAGCTGCTTTACATGTCTTTGAGGGCATAGACATAGGTGTTGTGACTCCTAAGATTAAAATTGCCCTTTCCAGAAGCAGAGAACGCCGCAAGAGACATTCTCAAAATCATGCTGAACCGCAAATGTCAATACATTCTGTTGGCTTATTATTGGAATCTGTCTTCCTCAAAGCAAAATCTTTGCAGATTCTTGAAAGATTTAAAGAGGCTGCCCAATCTTGCAAAGTTATTTTGGATATAGTGGAGTCTTCATTGCCCGAAGGCTTGCCCGATAACTTCGGTGCTGAATGTAAATTACAGGAGACCCTGAACAAGGCAGTTGAGCTGCTTCCAGACTTATGGAAACTTGCTGATTGTCCACGTGAAGCTATTTTGTCTTACCGACGAGCACTACTTCATCAATGGAATCTTGATGCAGAGACTATAGCAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTTTACAGTGGAGGAGAAGCCACACCGCCTAATCTCCGTTCCCAAATGGATGGCTCATTTGTACCTAGAAACAACATAGAAGAGGCTATACTTATCTTAATGATTTTGTTAAGAAAAGTTACTCTAAATAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTCTCATTTGCTCTGTCAGTTTCTGGAGATTTGACAGCTTTAGCCAATCAATTGGAAGAATTGCTTCCACGGACAATTCATAGAAGTGAAAGGTACTATGCTCTAGCTCTTTGTTATTATGGAGCAGGTAAGGATCTGGTAGCACTGGATTTTCTCAGAAAGTTGTTGAGTAGTAGAGAGGACCAAGAACATGTTCCTGGTTTGTTATTGGCTTCTAAGATTTGTTGTGAGAACTGTTCTCTTGCTGAAGAAGGAGTAACCTTCGCCAAGCGAGTGCTTCAGAACTTGGACGGCAGATGTAATCAGCTAGAAGATCATGCTAATTTCTTTCTTGGTGTCTCACTTTCAGCACAGTCAAAATTGGCTATTTCTGATTCTGAGATGTTTAAGAGACAATCTGAGGCACTTCATGCCCTAGAAACTGCTGCCAGAACGAGAAACCCCCTTGTACTATATCATCTCAGTCTAGAATATGCAGAACAAAGGAAGTTGGATGCCGCACTTCAGTATGCAAAATGCTGTATAAAACTGGAAGCTGGTACTAATATTAAAGGATGGTTGTTGTTAGCCCGGATATTGTCTGCTCAGAAACAGTTTTTGGATGCCGAATCTATCATTGATTCTGCTTTGGATCAAACTGGAAAATGGGATCAGGGTGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCAAGTTAAGGAATGCCATTGAGACATACACCCAGCTTCTTGCTGTTCTTCAAATTCAGAGTAAAGGTTTTGGTTCTGGAAAGAAGCTATATAAGGACAATAGAGATCGTGCTAGGAACTTGGAAGTGGAAATATGGCATGATATTACTTATGTGTATATCAGTCTTTTACAGTGGCATGACGCAGAAGTGTGTCTTTCAAAATCCAAGGCCATCAAACCACTCTCAGCATCTAGATATCATGCAATAGGCATAATGTACGAAGCAAAGGGCCATTACAAAGAGGCTCTAAAATCTTTTGGTGATGCTTTGGACATTGATCCTGGCCATGTCCTTAGCTTAGTCTCCAGTGCTGTAGTTCTTAAACGATGTAGTAGTCACTCAAATCCAGCAGTTAAAAGCTTTCTGATGGACGCGCTAAAGCAGGACAGATTCAATGCTTCTGCTTGGTATAATCTTGCCCTTCTTCAGAAAGCTGAGGGCACAGCAACATCCTTAGCTGAAGCTGCAGAATGTTTTCAAGCTGCACATGTTCTTGAAGAATCTGAACCTGTTGAACCTTTCAGATGA 2136 0.411 MKCLRSGESFGGADEVFPSSGSLASATKDFSASEHSCLAEHIDKKQDTGNIEEAESSLRESGVLNYEEARALLGRYEYQKGNIVAALHVFEGIDIGVVTPKIKIALSRSRERRKRHSQNHAEPQMSIHSVGLLLESVFLKAKSLQILERFKEAAQSCKVILDIVESSLPEGLPDNFGAECKLQETLNKAVELLPDLWKLADCPREAILSYRRALLHQWNLDAETIAKIQKEFVVFLLYSGGEATPPNLRSQMDGSFVPRNNIEEAILILMILLRKVTLNRIEWDPSILDHLSFALSVSGDLTALANQLEELLPRTIHRSERYYALALCYYGAGKDLVALDFLRKLLSSREDQEHVPGLLLASKICCENCSLAEEGVTFAKRVLQNLDGRCNQLEDHANFFLGVSLSAQSKLAISDSEMFKRQSEALHALETAARTRNPLVLYHLSLEYAEQRKLDAALQYAKCCIKLEAGTNIKGWLLLARILSAQKQFLDAESIIDSALDQTGKWDQGDLLRTKAKLQIAQGKLRNAIETYTQLLAVLQIQSKGFGSGKKLYKDNRDRARNLEVEIWHDITYVYISLLQWHDAEVCLSKSKAIKPLSASRYHAIGIMYEAKGHYKEALKSFGDALDIDPGHVLSLVSSAVVLKRCSSHSNPAVKSFLMDALKQDRFNASAWYNLALLQKAEGTATSLAEAAECFQAAHVLEESEPVEPFR* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02891 711 SMART tpr_5 473 506 IPR019734 GO:0005515
Phac7g02891 711 SMART tpr_5 565 598 IPR019734 GO:0005515
Phac7g02891 711 SMART tpr_5 134 167 IPR019734 GO:0005515
Phac7g02891 711 SMART tpr_5 319 352 IPR019734 GO:0005515
Phac7g02891 711 SMART tpr_5 669 705 IPR019734 GO:0005515
Phac7g02891 711 SMART tpr_5 599 632 IPR019734 GO:0005515
Phac7g02891 711 SMART tpr_5 509 542 IPR019734 GO:0005515
Phac7g02891 711 SMART tpr_5 438 471 IPR019734 GO:0005515
Phac7g02891 711 ProSiteProfiles TPR repeat region circular profile. 599 630 - -
Phac7g02891 711 SUPERFAMILY TPR-like 510 681 IPR011990 GO:0005515
Phac7g02891 711 ProSiteProfiles TPR repeat profile. 599 632 IPR019734 GO:0005515
Phac7g02891 711 Pfam Tetratricopeptide repeat 602 632 IPR013105 -
Phac7g02891 711 Gene3D Tetratricopeptide repeat domain 102 546 IPR011990 GO:0005515
Phac7g02891 711 Gene3D Tetratricopeptide repeat domain 548 707 IPR011990 GO:0005515
Phac7g02891 711 PANTHER PROTEIN NPG1 1 711 IPR043376 -
Phac7g02891 711 SUPERFAMILY TPR-like 310 535 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02891 Phac-Chr7 32707894 32713991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02891 1 711 Calmodulin-binding Proteins AT4G28600 57.676 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02891 K21843 - gmx:100800762 1253.43