Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02883 ATGGAGCATGTGATTGGTGGCAAGTTTAAATTGGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTATTTAGGTGTTAATATACAAACTGGAGAGGAGGTGGCTGTTAAGCTGGAGCCTGTGAAGACCAGGCATCCACAGCTTCACTACGAGTCAAAACTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAACTGAGGGAGACTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAATTATTGTAACCGGAAGTTCACACTGAAAACAGTGTTAATGCTTGCTGATCAGTTAATTAACAGAGTTGAATATATGCATTCGAGAGGTTTCCTTCACCGTGATATCAAGCCCGACAATTTCTTAATGGGTTTAGGACGGAAAGCAAATCAAGTGTATGCCATTGATTATGGCCTTGCAAAAAAGTATAGGGATCTTCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGTACAGCACGCTATGCAAGTGTCAATACTCATATTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTATTTCTTAAGAGGAAGTCTTCCCTGGCAAGGACTTAAGGCTGGCACCAAAAAACAAAAATATGATAAAATCAGTGAGACAAAGGTGTCAACTCCCATAGAGGTGCTTTGCAAATCTTATCCCTCTGAATTTGTATCATACTTCCACTATTGCCGATCATTGCGATTTGAGGACAAACCAGATTATTCGTATTTAAAGAGACTTTTCCGAGACCTGTTTATTAGAGAAGGCTATCAGTTTGACTACATTTTTGACTGGACTATGTTAAAGTATCCACAGATCAGTAGCAGCTCAAGAGGGCGGCAGCATGTCACTGGCAAGGCAGCTATGCAAGCAAGTCCACATGTACAAAAGCAAGAAAAAATCTCAGTTGGGAAAGACATTCGAGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCAGGAGGAATCCTGGAGGTTCAAGTCCTCATGTTGATCACATCAAACAGAGGAGTTTTGAGGATGTACCGGTGCAAAAGGATTTGCACTATGGACAGCACAATAGTGGTCGATATGGCAGCAGTTCTAGAAGAGCCATGATCACATCAAACAAGCCAGTTTCCTCAGGTGACCATACTGGCAGGCCAACCATAACTGGGAGCCGTCCATCTGGTGTTCATAGAGTTCAACCGGCCTATGACACCAAACAAGCAAATCATGCACGTGGTTCCTCTGCCAGAGGCCACCGTGATGATCCTCTGAGGAGCTTTGAGCTCCTCAACATCAGGAAGTAA 1365 0.4337 MEHVIGGKFKLGRKIGSGSFGELYLGVNIQTGEEVAVKLEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGTEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHIGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISETKVSTPIEVLCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTMLKYPQISSSSRGRQHVTGKAAMQASPHVQKQEKISVGKDIREKFSGAVEAFSRRNPGGSSPHVDHIKQRSFEDVPVQKDLHYGQHNSGRYGSSSRRAMITSNKPVSSGDHTGRPTITGSRPSGVHRVQPAYDTKQANHARGSSARGHRDDPLRSFELLNIRK* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02883 454 FunFam Putative Casein kinase I 1 85 - -
Phac7g02883 454 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Phac7g02883 454 CDD STKc_CK1_delta_epsilon 8 282 - -
Phac7g02883 454 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g02883 454 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Phac7g02883 454 PANTHER CASEIN KINASE-RELATED 8 325 - -
Phac7g02883 454 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g02883 454 Gene3D Transferase(Phosphotransferase) domain 1 1 367 - -
Phac7g02883 454 MobiDBLite consensus disorder prediction 434 454 - -
Phac7g02883 454 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g02883 454 MobiDBLite consensus disorder prediction 378 414 - -
Phac7g02883 454 FunFam Casein kinase 1-like protein 1 331 - -
Phac7g02883 454 MobiDBLite consensus disorder prediction 373 454 - -
Phac7g02883 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02883 Phac-Chr7 32638583 32644437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02883 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 2.30e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Phac7g02883 Pkinase 2.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02883 K08960 K08959 gmx:100789031 856.67