Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02882 ATGATGAAAGTGGGATTCGAGCTGGTTCATGCAAATCATAATCCAAACATGATTCGTCCACACATGCATGAAACATGGGATCATTACTCCTTGCCTTTTTCATCTCCAACTCCAACTCCATCAAACCTATATCCAAAGCCAGCAACAGAAAACCACTGCCTAAACTTGGGGCAGAATGAACTCTCTGATTGGATGGAGGAACACATTGGTGACATCACCAAACACCTTGTTGAAGACTTACCAGAAACCAGTTCTGATAGCTTGATGGCTAATAACACAGCAAGGGTTTCCCATCACAACTTTGTTCCCTCACTTTTGCCCAACTTCAGTCAAAGAAAAGCTTCATGCTTTAGACAATTTGAGACCATCAGCAACGACCCCCCGAACTTCAATCTTCACTCAGGTTTAGATGATAGCTACAATGTTTGTGATCAAGGGTTGAGCCTGATAACCCTTCTAATGGAGTGTGCAGTGGCAATTTCAGTTGACAACCTGGGTGAGGCTCATAGGATGTTACTAGAGCTAACACAAGTGGCCTCACCCTACAAAGCGTCATGTGCTGAACGTGTTGTTGCTTATTTTGCCAAGGCCATGACTGGGAGGGTGATGAATTCCTGGCTTGGGGTGTGTTCCCCTTTGGTTGATCACAAGAACATTAACTCGGCATTCCAAGTGTTCAACAACGTGTCCCCTTTCATAAAATTTGCTCACTTCACTTCCAACCAGGCAATCCTTGAGGCAGTGAACCATTGTGACAGTATTCACATCATTGACTTGGACATCATGCAAGGGCTGCAATGGCCGCCTTTTTTCCACATATTAGCCACCAGAATGGAGGGTCCACCACAGGTCACGATGACATGTTTGGGAACCTCAATGGAACTCCTTGTTGAAACTGGTAAACAACTCTCAAACTTTGCAAGAAGGCTTGGCATGTCATTCAAGTTCCACCCCATTGCAAGCAAGTTTGGGGAAGTAATTGATGTGTCCATGTTGCATGTAAAGCCTGGCGAGGCAGTGGCAGTGCATTGGTTGCAGCATTCACTCTACGATGCAACTGGACCTGATTGGAAAACACTGAGGCTCCTTCAGGAGTTGGACCCAAGAATCATTACCTTGGTAGAGCAGGATGTGAACCATGGAGGCTCTTTCTTGGACCGTTTTGTGGCCTCCTTGCACTACTACTCCACCCTTTTTGATTCTCTTGGAGCATACTTGCACTTTGATGATTCAAACAGGCACCGAGTGGAGCATGGCCTTCTCTCCAGGGAGATCAACAATGTGTTGGCCATAGGAGGCCCTAAGAGGAATGGTGAAGACAAGTTTAGGCAGTGGAGAACCGAACTTGCTAGCCACTGTTTTGCACAGGTTCCAATGAGTGCCAATTCAATGGCTCAAGCTCAGTTGATATTGAACATGTTTTCACCAGCTTATGGGTATAGCCTTGCACAAGTTGATGGCACATTAAGGCTTGGTTGGAAGGATACAAGTTTGTACACGGCTTCTGCATGGACCTGCTGTACTTCTAACTAG 1533 0.4586 MMKVGFELVHANHNPNMIRPHMHETWDHYSLPFSSPTPTPSNLYPKPATENHCLNLGQNELSDWMEEHIGDITKHLVEDLPETSSDSLMANNTARVSHHNFVPSLLPNFSQRKASCFRQFETISNDPPNFNLHSGLDDSYNVCDQGLSLITLLMECAVAISVDNLGEAHRMLLELTQVASPYKASCAERVVAYFAKAMTGRVMNSWLGVCSPLVDHKNINSAFQVFNNVSPFIKFAHFTSNQAILEAVNHCDSIHIIDLDIMQGLQWPPFFHILATRMEGPPQVTMTCLGTSMELLVETGKQLSNFARRLGMSFKFHPIASKFGEVIDVSMLHVKPGEAVAVHWLQHSLYDATGPDWKTLRLLQELDPRIITLVEQDVNHGGSFLDRFVASLHYYSTLFDSLGAYLHFDDSNRHRVEHGLLSREINNVLAIGGPKRNGEDKFRQWRTELASHCFAQVPMSANSMAQAQLILNMFSPAYGYSLAQVDGTLRLGWKDTSLYTASAWTCCTSN* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02882 510 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 119 501 IPR005202 -
Phac7g02882 510 Pfam GRAS domain family 149 505 IPR005202 -
Phac7g02882 510 ProSiteProfiles GRAS family profile. 140 505 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02882 Phac-Chr7 32626585 32628436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02882 144 505 GRAS Transcription Factor Family AT3G54220 56.098 1.76e-136 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac7g02882 GRAS 1.5e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02882 - - gmx:100775656 889.026