Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02867 ATGGGTCTTAGAGACATTGGTGCTTCACTTCCCCCAGGTTTTCGCTTCTATCCGAGTGATGAGGAGTTGGTCCTTCATTACCTTTACAAAAAGGTCACAAATGAGGAAGTTCTGAAGGGTACCTTGATGGAAATTGACCTGCACATATGCGAGCCATGGCAACTTCCAGAGGTGGCTAAGCTTAACGCAAACGAATGGTACTTCTTCAGCTTTCGTGACCGCAAATACGCAACCGGCTACCGGACCAATCGCGCAACAACATCTGGGTATTGGAAAGCCACGGGAAAGGATCGGACGGTGTTTGACCCCTCCACGCGTGAGGTTGTAGGGATGAGGAAGACTTTGGTGTTCTACAGGAACAGGGCCCCAAATGGCATCAAAACGGGTTGGATCATGCACGAGTTTCGTTTGGAGACGCCACATATGCCCCCTAAGGAGGACTGGGTTTTGTGTAGAGTGTTTCACAAAGGCAAAGCAGACAACAGTGCCAAACTCAACTCACAACTCATGTATGAGACCACAGTTCCATCCCTAACTTTGGCTTCGTCATCTCCAACCAACCAAACCATTGGGTATAACCAACTTCCCCATTTCTCTTCCTCAATCACAACCCAAAACAACAACTCTTTCATGGGTCTCCTTCACTTTTCAAGGGAAACAAATGCAAACTCTAGCACCATTACTCAAATAAGTCCCAAATGTGATGATGGGTATGGGTTTCTATGGGACATGGAGATGGAAGAAAGTAGCTTCCACGATGGCGTGGCCTCGAATATGGTGGACGGAATGAGATTCGACGTTGATAATAATAGTGTGGTGTTGTTATGA 828 0.4698 MGLRDIGASLPPGFRFYPSDEELVLHYLYKKVTNEEVLKGTLMEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVFDPSTREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKGKADNSAKLNSQLMYETTVPSLTLASSSPTNQTIGYNQLPHFSSSITTQNNNSFMGLLHFSRETNANSSTITQISPKCDDGYGFLWDMEMEESSFHDGVASNMVDGMRFDVDNNSVVLL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02867 275 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Phac7g02867 275 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 206 - -
Phac7g02867 275 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Phac7g02867 275 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Phac7g02867 275 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02867 Phac-Chr7 32515740 32520451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02867 9 171 NAC Transcription Factor Family AT1G76420 55.689 7.26e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac7g02867 NAM 1.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02867 - - gmx:100783645 478.404