Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02865 ATGCATATAGGTCAGACAGATACAACTTCTGTGAAATGTCTGATCAACAGCATTTCTCGATTCATTCACTTGGTTTCATGTCAATCAATGAAACCTGTGCCCTTTCAGAAGATCTGTAATAATATGGTTGGGGTGTTAAAGCGTTTGAAGCCGGTGCTTGATGACGTTATGGATCACTTAATCCCATCAGATGTCAATCTATGTAAAGAGTGTGAGGAATTGGATAACCGAGTTAATGAAGCCAGAGATTTCATTGAAAAATGGAGTCCAAAGATGAGCAGGATTCACAGTGTTCTACAAGGTGGTACATTGTTGATCAAGTTACAGAGCACTTCACTAGATATCTGTCACATGATAGTTAGATCCTTACAGTCACCTCCATCTGCATCAGTTTTGGCTAATCTCCAGCACTATATCCAGGAACTTCAGTGTCTCAAGAAGGAAATTGCAATGGTCTATATAGAAGAAGCACTGAGAAACCAAAGAGACAATATTGAACCATGCAAGGATCGTCTCAAGGAAATTATTGAGTTACTTAAATTGACATCAAATCAGGAGCTCTTAAAAGAAAGCATTGCTGTAGAAAAGGAAAGGTTGAACACTGAAGCCAATAAAATGATAGCGGACATTGAAGAAATTAATGAAATTGTGAATCTTGTCCGTAGTTTGCGTGATTATGTGATCAAAACTGAGTGCCCTGTAGTCAAGAGTGGTCTCTCAATCCCCCCATACTTCCTCTGTCCTTTATCGTTGGAACTCATGTTGGATCCTGTTATTGTGGCTTCGGGTCAAACATATGAGAGGCAATCCATCCAAAAGTGGCTTGATCATGGGCTGACAGTTTGTCCCAAAACTCGTCAGAGACTTACCCATACAAATCTCATTCCCAATTACACTGTCAAAGCTATGATAGCAACTTGGTGTGAGGAAAATAATGTCAAACTTTCTGGTAACTCTGAGCACAAAAAATATGCCTGTGTCCCCATGGATAATTTATTGCCTCAAGATTTAACTCATGATTGCCGTGCTGGGTCTTTATCTAGTAGCAATTCCATTTCAAGATCATCTCTTCAAACTGAAAATGCATTTGAAAAGCAAAAGGGTAATAACTCTATCAGATTATGTGGAGAATACAATGGATGCCAGAGTGAAGCAGCTGAAAAGTGTGAGCAAGAGTCCCCATATACTCACAGCAGAAGTGAATCATTTTCAAGTTCAATTTCTAGTACTGATTGTGCAGTTTCGAAAGAGGTGTCAGGGATATCCAGTAGGCATCAAAATGTGAAGGTGCTCTCTGGAGAAATCACAAACACGTGTCCTTCTCCTGGTAACAAACAATCAGGGGTATCTCCTTTGTTATCTGGAAAGGCATTTCAAAACCCTGGATCAAATGTGGGATTGTTGGAGAATGGAAACAATAACGATAATAATAATAACAATAGTAATAATAATAGTCTTTCAAGATTTGATTCCCATTCTGTTTTCAACTCCGGGTCAGATGAATTGACCACATCATCTCAAGCCATTAGATTGATTGAAGATCTTCACAGCCAATCAATTGAAACACAGACTACTGCTGCAGAAGAATTGAGGCTCCTCACAAAGCATAACCGGGAAAACCGTACCATTGTAGGGCAGTGTGGGGCTGCCATGCCTTTGCTTTCATTGCTATATTCAGACATGAAGGTAACACAAGAGCATGCTGTGACAGCTCTACTGAACTTGTCAATTAATGAAGATAACAAAGCCTTGATCATGGAAGCAGGAGCCATAGAACCTCTAATCCATGTTTTGAAGACAGGAAATGATAGTGCCAAGGAGAATTCTGCGGCAACTCTATTCAGCCTCTCAGTAATTGAGAACAATAAGGCAAGAATTGGTCGTTCTGGAGCGGTTAAAGCTTTGGTTGATCTTCTTGCCTCAGGGACTCTTAGAGGAAAGAAGGATGCCGCTACTGCTTTATTTAACCTGTCAATATTTCATGAGAATAAAGCTCGTATAGTTCAAGCTGGAGCAGTGAAATTTCTGGTTCGGTTAATGGACAATGCTGGTGGAATGGTTGACAAGTCTGTTGCTCTTCTGTCAAACCTGTCAACAATTCCAGAGGGCCGAATAGAAATTGCAAGGGAAAGGGGTATCCCCTTACTTGTTGAAGTTGTTGAGTCAGGTTCCCAGAGGGGAAAGGAAAATGCTGCCTCCATTCTCTTGCAATTGTGCCTTCATAGTTCTAAGTTCTGTAATCTGGTTTTGCAAGAAGGAGCTGTCCCTCCCCTAGTTGCATTGTCAGTATCTGGTACTCCAAGAGCAAAGGAAAAGGCACAACAGCTTCTCAGCCATTTTCGCAATCAGCGGGAACAAGCTGCTTCTGGGAAGGGAAAATCATGA 2385 0.4088 MHIGQTDTTSVKCLINSISRFIHLVSCQSMKPVPFQKICNNMVGVLKRLKPVLDDVMDHLIPSDVNLCKECEELDNRVNEARDFIEKWSPKMSRIHSVLQGGTLLIKLQSTSLDICHMIVRSLQSPPSASVLANLQHYIQELQCLKKEIAMVYIEEALRNQRDNIEPCKDRLKEIIELLKLTSNQELLKESIAVEKERLNTEANKMIADIEEINEIVNLVRSLRDYVIKTECPVVKSGLSIPPYFLCPLSLELMLDPVIVASGQTYERQSIQKWLDHGLTVCPKTRQRLTHTNLIPNYTVKAMIATWCEENNVKLSGNSEHKKYACVPMDNLLPQDLTHDCRAGSLSSSNSISRSSLQTENAFEKQKGNNSIRLCGEYNGCQSEAAEKCEQESPYTHSRSESFSSSISSTDCAVSKEVSGISSRHQNVKVLSGEITNTCPSPGNKQSGVSPLLSGKAFQNPGSNVGLLENGNNNDNNNNNSNNNSLSRFDSHSVFNSGSDELTTSSQAIRLIEDLHSQSIETQTTAAEELRLLTKHNRENRTIVGQCGAAMPLLSLLYSDMKVTQEHAVTALLNLSINEDNKALIMEAGAIEPLIHVLKTGNDSAKENSAATLFSLSVIENNKARIGRSGAVKALVDLLASGTLRGKKDAATALFNLSIFHENKARIVQAGAVKFLVRLMDNAGGMVDKSVALLSNLSTIPEGRIEIARERGIPLLVEVVESGSQRGKENAASILLQLCLHSSKFCNLVLQEGAVPPLVALSVSGTPRAKEKAQQLLSHFRNQREQAASGKGKS* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02865 794 SUPERFAMILY ARM repeat 511 780 IPR016024 -
Phac7g02865 794 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 315 IPR013083 -
Phac7g02865 794 Pfam U-box domain 241 312 IPR003613 GO:0004842|GO:0016567
Phac7g02865 794 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 630 672 IPR000225 GO:0005515
Phac7g02865 794 SMART arm_5 660 699 IPR000225 GO:0005515
Phac7g02865 794 SMART arm_5 700 740 IPR000225 GO:0005515
Phac7g02865 794 SMART arm_5 578 618 IPR000225 GO:0005515
Phac7g02865 794 SMART arm_5 619 659 IPR000225 GO:0005515
Phac7g02865 794 SMART arm_5 537 577 IPR000225 GO:0005515
Phac7g02865 794 SUPERFAMILY RING/U-box 240 315 - -
Phac7g02865 794 Gene3D - 582 791 IPR011989 -
Phac7g02865 794 ProSiteProfiles U-box domain profile. 240 314 IPR003613 GO:0004842|GO:0016567
Phac7g02865 794 Pfam Armadillo/beta-catenin-like repeat 622 658 IPR000225 GO:0005515
Phac7g02865 794 Pfam Armadillo/beta-catenin-like repeat 578 617 IPR000225 GO:0005515
Phac7g02865 794 FunFam RING-type E3 ubiquitin transferase 466 786 - -
Phac7g02865 794 Coils Coil 196 216 - -
Phac7g02865 794 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 671 712 IPR000225 GO:0005515
Phac7g02865 794 CDD RING-Ubox_PUB 242 294 IPR045210 -
Phac7g02865 794 PANTHER U BOX DOMAIN-CONTAINING 34 781 - -
Phac7g02865 794 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 589 631 IPR000225 GO:0005515
Phac7g02865 794 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 548 590 IPR000225 GO:0005515
Phac7g02865 794 MobiDBLite consensus disorder prediction 434 492 - -
Phac7g02865 794 FunFam RING-type E3 ubiquitin transferase 238 314 - -
Phac7g02865 794 Gene3D - 505 581 IPR011989 -
Phac7g02865 794 SMART Ubox_2 244 307 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02865 Phac-Chr7 32442173 32447614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02865 7 794 U-box Gene Family AT3G54790 54.010 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02865 - - gmx:100800949 1317.37