Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02859 ATGCCGTCGCTCCTCTCTCCGGGGAGAATTCACTGTCTGGAGGTGGACAATTTCAAGTCCTACAAGGGCTTCCAAATGATCGGCCCCTTCTACGACTTCACTGCCATCATCGGCCCCAACGGCGCTGGTAAGTCCAACCTCATGGACGCCATCAGCTTCGTCCTCGGCGTCCGTACCGGCCAGCTCCGCGGCGCGCAGCTTAAGGACCTCATCTATGCCTTCGACGACGGTGAGAAGGACCAGAAGGGTCGCCGAGCCTTCGTCCGCCTCGTCTACCACCTCGCCAACTCCACTGAGATCAGATTCACCCGTACCATCACCAGCGCCGGCTCCAGCGAGTACCGCATCGATGACACCCTTGTCAATTGGGACACCTACAACAACAGACTCAAGTCCCTTGGCATCCTCATCAAAGCTCGCAATTTCTTGGTCTTTCAGGGTGATGTCGAGTCCATTGCATCGAAGAATCCCAAAGAACTCACTGCACTGGTGGAGCAGATATCTGGCTCTGATGAGTGCAAGAGGGACTATGAACAGTTTGAAGAGGAAAAAGGCATTGCTGAAGAAAAATCAGCGCTTGTTTATCAGAAGAAAAAGACTGTGGTTATGGAAAGAAAGCAGAAGAAAGAACAGAAGGAAGAAGCAGAGAAGCATCTCCGCCTGCAACAAGAACTGAAATCTATGAAGAGAGAACATTTCTTGTGGCAGTTGTTTAATATACACAATGATTATGTTAAAACAATTAAGGATCTTGAAGATGAGGAGAGAAGTCGTGAAGGTGTTGTTAAAGAGCTGGAAAATTTTGAAAATGAAGCTAGTAAAAAGAAAAAAGAGCAGGCCAAATATCTCAAAGAGATTGCACTGCGGGAAAAGAGAATTAATGAGAAAAACAGCAAGCTTGACAAGAGTCAGCCTGAGCTTCTGAAGTTAAAGGAGGAAATGACTCGTATCACTTCAAAAATTAAGAAAGGGAAGAAAGAACTTGATAAAAAAAAGGTTGAACGGACGAAGCATGATGCTGATATTGCATTGCTACAGAATGGCATCCAGGATCTTACAGCAAAAATGGTAGAACTTCAGGAAAAGGGACGCGATGTTGGTGATGAGCTTGATTTGCAAGGCAATGATTTGGATGAGTATTTTCGAATCAAAGAGGAAGCTGGGATGAAAACTGCAAAGCTTAGAGAAGAAAAGGAGCTTCTAGATAGGAAACTAAATGCTGATAGCGAAGCTCGAAATAATTTGGAAGAAAATCTTCAACAGTTAAGAAACAGGGAGTCTGAACTGAATTCTCAGGAAGAACAGATGCGAGCAAGGCTTGAAAAAATTCTTGATAATTCTGCAAAAAATAGAACTGGCCTTGAAAACTTGAAAAAAGAACTACGTGTGATGCAGGACAAACATCGTGATTCCAAGAAAAAATATGAAAATTTGAGGTTAAAAATTGGTGAAGTAGAAAATCAACTACGTGAATTGAGGGCTGATAGATATGAAAGTGAGAGAGATGTTAGGTTGTCTCAGGCTGTTGAGACTCTGAAACGCCTGTTTCAAGGAGTTCATGGTCGCATGACTGATCTTTGTAGGCCAACAATGAAGAAGTATAACCTTGCTGTTACTGTTGCTATGGGCAAATTTATGGATGCAGTTGTAGTTGACAAGGAGTCAACTGGGAAGGAATGCATCAAGTATTTAAAAGATCAGAGGCTTCCTCCCCAGACATTTATTCCTCTGGAATCAGTTCGGGTGAAGCCAATAATGGAAAGATTGCGCACATTAGGGGGTACAGCAAAACTGGTGTTTGATTGCAAGTTTGATCCCTCCTTGGAGAAGGCAATTCTCTTTGCTGTTGGGAACACTCTTGTTTGTGATGATCTTGAGGAGGCCAAAATTTTAAGCTGGAGTGGAGAGAGGTTTAAAGTTGTAACTGTGGATGGAATTCTGCTCACAAAATCCGGCACAATGACTGGAGGCACTAGTGGTGGAATGGAGGCAAGGTCAAAACAGTGGGATGACAAGAAAATTGAAGGACTTAATAAAAAGAAAGAGCAGTATGAAACAGAGTTGGAATCGCTAGGATCAATACGAGATATGCACCTTAAAGAGTCTGAAGCATCTGGAAAAATTAGTGGACTTGAGAAGAAAATTCAATATGCAGAGATTGAGAAGCGAAGCATTGAAGATAAACTTTCAAATCTGAGCCATGAAAAGAAGACAATCAAAGAAAGAATTGAATGTATCAGTCCAGAGCTAAAGAAGTTAAATGATGCTGTTAACAAGAGCAATGCAGAAATACGCAAGCTTGAGAGGAGGATAAATGAAATTACTGATAGGATATACAGAGACTTCAGCAAGTCAGTTGGGGTAGCAAACATCCGTGAATATGAAGAAAATCGACTCAAGGCTGCTCAAAATATAGCAGAGGAGAGGCTGAACTTGAGTAGCCAACTTTCAAAATTAAAATATCAGTTGGAGTATGAGCAAAATCGGGACATGAGTTCACGAATTCTAGAATTGGAAGCTTCTCTAAGTGCTTTAGAGAAAGATTTAAAACGTGTACAGGATAGAGAGGCTGCAGCGAAGTTAGCAGCTGAGAAGGCTACTGAAGAGGTTAATCAGTTAAAGGAAGAAGTTAAAGAGTGGAAATCAAAGTCAGAAGATTGTGAAAAGGAAATCCAAGAGTGGAAGAAGAAAGCTTCTGCAGCCACAACAAACATATCCAAACTTAATCGCCTGATACATTCTAAGGAGGCACAGATTGATCAGTTGAATGTGCAAAAGCAGGAAATACTAGAAAAGTGTGAACTTGAACAGATTGACCTCCCGATCTTACCAGATCCCATGGATACTGATAGCTCGGTACCAGGTCCACTTTTTGATTTTGATCAACTAAGTAGGGCACTGAAAGACAAGAGACACTCAGACAGGGATAAAATTGAGGTAGAATTTAAGCAAAAAACTGATGCCTTGGCATCTGAGATTGAAAGAACAGCACCAAATTTGAAGGCATTGGATCAATATGAGGCTCTGGTGGAAAAGGAAAGAGTTGTAACCGAGGAGTTTGAAGCTGTCAGGAAAGAGGAGAGGGAAAAAACACAGAGATTCAATGAGGTTAAGCAGAAAAGGTACCAATTGTTCATGGATGCTTTTAACCATATATCTGGTAATATAGATAAAATTTACAAACAACTTACAAAGAGCAATACACATCCACTGGGGGGAACAGCATACCTAAACTTGGAAAATGATGATGATCCCTTTCTTCATGGCATCAAGTACACTGCTATGCCCCCAACGAAACGTTTCCGTGATATGGAGCAGCTATCTGGTGGGGAAAAGACAGTTGCAGCACTTGCATTGCTATTCTCCATCCACAGTTATAAGCCTTCACCATTTTTTATATTGGACGAAGTTGATGCTGCGTTGGACAACTTGAATGTTGCCAAGGTTGCTGGCTTTATTCGTTCAAGATCATGCGAAGGGGCAAGGACTAGCCCGGATGCCGATGGGGGAAGTGGTTTTCAGAGTATTGTGATATCACTGAAAGACACTTTTTATGACAGAGCTGAAGCGTTAGTTGGGGTTTACAGAGATTCTGAAAGAAGCTGTTCGAGAACCCTCACATTTGATCTGACCAAATACCGGGATTCCTAA 3651 0.4215 MPSLLSPGRIHCLEVDNFKSYKGFQMIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGAQLKDLIYAFDDGEKDQKGRRAFVRLVYHLANSTEIRFTRTITSAGSSEYRIDDTLVNWDTYNNRLKSLGILIKARNFLVFQGDVESIASKNPKELTALVEQISGSDECKRDYEQFEEEKGIAEEKSALVYQKKKTVVMERKQKKEQKEEAEKHLRLQQELKSMKREHFLWQLFNIHNDYVKTIKDLEDEERSREGVVKELENFENEASKKKKEQAKYLKEIALREKRINEKNSKLDKSQPELLKLKEEMTRITSKIKKGKKELDKKKVERTKHDADIALLQNGIQDLTAKMVELQEKGRDVGDELDLQGNDLDEYFRIKEEAGMKTAKLREEKELLDRKLNADSEARNNLEENLQQLRNRESELNSQEEQMRARLEKILDNSAKNRTGLENLKKELRVMQDKHRDSKKKYENLRLKIGEVENQLRELRADRYESERDVRLSQAVETLKRLFQGVHGRMTDLCRPTMKKYNLAVTVAMGKFMDAVVVDKESTGKECIKYLKDQRLPPQTFIPLESVRVKPIMERLRTLGGTAKLVFDCKFDPSLEKAILFAVGNTLVCDDLEEAKILSWSGERFKVVTVDGILLTKSGTMTGGTSGGMEARSKQWDDKKIEGLNKKKEQYETELESLGSIRDMHLKESEASGKISGLEKKIQYAEIEKRSIEDKLSNLSHEKKTIKERIECISPELKKLNDAVNKSNAEIRKLERRINEITDRIYRDFSKSVGVANIREYEENRLKAAQNIAEERLNLSSQLSKLKYQLEYEQNRDMSSRILELEASLSALEKDLKRVQDREAAAKLAAEKATEEVNQLKEEVKEWKSKSEDCEKEIQEWKKKASAATTNISKLNRLIHSKEAQIDQLNVQKQEILEKCELEQIDLPILPDPMDTDSSVPGPLFDFDQLSRALKDKRHSDRDKIEVEFKQKTDALASEIERTAPNLKALDQYEALVEKERVVTEEFEAVRKEEREKTQRFNEVKQKRYQLFMDAFNHISGNIDKIYKQLTKSNTHPLGGTAYLNLENDDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSRSCEGARTSPDADGGSGFQSIVISLKDTFYDRAEALVGVYRDSERSCSRTLTFDLTKYRDS* 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02859 1216 Coils Coil 170 190 - -
Phac7g02859 1216 Coils Coil 708 742 - -
Phac7g02859 1216 Coils Coil 828 932 - -
Phac7g02859 1216 Pfam SMC proteins Flexible Hinge Domain 517 631 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Phac7g02859 1216 Coils Coil 398 446 - -
Phac7g02859 1216 Coils Coil 251 285 - -
Phac7g02859 1216 Coils Coil 454 502 - -
Phac7g02859 1216 PIRSF SMC 8 1212 IPR024704 GO:0005524|GO:0016887
Phac7g02859 1216 Gene3D - 906 1215 IPR027417 -
Phac7g02859 1216 Gene3D - 8 231 IPR027417 -
Phac7g02859 1216 Coils Coil 198 231 - -
Phac7g02859 1216 Pfam RecF/RecN/SMC N terminal domain 10 1198 IPR003395 -
Phac7g02859 1216 SUPERFAMILY Smc hinge domain 481 681 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Phac7g02859 1216 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER 9 1215 - -
Phac7g02859 1216 CDD ABC_SMC1_euk 10 157 IPR028468 GO:0005524|GO:0007062|GO:0008278|GO:0016887
Phac7g02859 1216 Coils Coil 307 327 - -
Phac7g02859 1216 Coils Coil 342 362 - -
Phac7g02859 1216 Gene3D - 578 659 - -
Phac7g02859 1216 Coils Coil 750 777 - -
Phac7g02859 1216 FunFam Structural maintenance of chromosomes 1A 9 224 - -
Phac7g02859 1216 Coils Coil 674 694 - -
Phac7g02859 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 1157 IPR027417 -
Phac7g02859 1216 Gene3D - 498 577 - -
Phac7g02859 1216 Coils Coil 791 811 - -
Phac7g02859 1216 SMART SMC_hinge_2 517 632 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Phac7g02859 1216 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 891 1207 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02859 Phac-Chr7 32380214 32397603 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02859 8 114 Structural Maintenance of Chromosomes family AT5G61460 32.456 7.09e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02859 K06636 - gmx:100785315 2148.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02859 7 32380214 32397603 Phac7g02859 7 32380214 32397603 ECH