Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02856 ATGGTTATTGATTTTGTGTGTGGAGAAACAGTGACAGGAAAGATGGGAAGAAGTCCTTGCAGTGAGGGATTGGGGTTGAACAAAGGGCTATGGACTCCAGAGGAAGATCTCATTCTCATCAATCATATCAACAAACATGGTCACAAAAATTGGCGTGCCCTACCCAGACAAGCTGGGCTTTTGAGGTGTGGAAAGAGTTGCAGACTCCGGTGGATAAACTATCTAAGGCCAGATATTAAACGGGGCAACTTTACAAGAGAAGAAGAAGACATGATAATCCAGTTGCATGAAAACCTGGGGAACAGATGGTCAGCCATAGCAGCAAAGTTAGCAGGTCGCACAGACAACGAAATAAAGAACGTGTGGAACACCCACTTGAAGAAGAGGTCCCAACAAGACAAAGACACAAAACGAAACCACTCCTTGGTCCGCACACAAATTTCCAAACAACAACAACAACCCGTGAATGCTCTTCCAACAGATCATGTCATCCAAACCACAGAAAAGAAGGCACTGTCTTCTCCACAGTGTGCAAGCAGTGACGTGTCAACCCTCACCGCTTCTACCACCTGTGACAGCAGTGACCACAAGAGTGTTGGTGCTATTCATCATCAGCATCACTTGCCCGTGAAGGCTGAATCGCTGGATGATGATTTCTGGTCTCAAGTTCTCTCACCTGGTAACTCCGGTGACACCAGCAGTTTTCCGGCCACCGGCGCGGCTGACCGGGACTTCCAATGTTCACTCTCTCCGTCATTGACTTCGAAAGGGGTGCATTCGTCAAGTGCGTACGATAATGTGAAGTTCTGGTACGATGTGTACATGGGAGAACAAGAATTAGGAGAGTTCTGA 852 0.473 MVIDFVCGETVTGKMGRSPCSEGLGLNKGLWTPEEDLILINHINKHGHKNWRALPRQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDMIIQLHENLGNRWSAIAAKLAGRTDNEIKNVWNTHLKKRSQQDKDTKRNHSLVRTQISKQQQQPVNALPTDHVIQTTEKKALSSPQCASSDVSTLTASTTCDSSDHKSVGAIHHQHHLPVKAESLDDDFWSQVLSPGNSGDTSSFPATGAADRDFQCSLSPSLTSKGVHSSSAYDNVKFWYDVYMGEQELGEF* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02856 283 SMART sant 27 77 IPR001005 -
Phac7g02856 283 SMART sant 80 128 IPR001005 -
Phac7g02856 283 FunFam MYB-related transcription factor 27 80 - -
Phac7g02856 283 Pfam Myb-like DNA-binding domain 81 126 IPR001005 -
Phac7g02856 283 Pfam Myb-like DNA-binding domain 28 75 IPR001005 -
Phac7g02856 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 130 IPR017930 -
Phac7g02856 283 CDD SANT 83 126 IPR001005 -
Phac7g02856 283 ProSiteProfiles Myb-like domain profile. 23 75 IPR001005 -
Phac7g02856 283 SUPERFAMILY Homeodomain-like 25 122 IPR009057 -
Phac7g02856 283 Gene3D - 28 80 - -
Phac7g02856 283 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 15 229 - -
Phac7g02856 283 Gene3D - 83 129 - -
Phac7g02856 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 75 IPR017930 -
Phac7g02856 283 CDD SANT 31 75 IPR001005 -
Phac7g02856 283 ProSiteProfiles Myb-like domain profile. 76 126 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02856 Phac-Chr7 32229987 32231529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02856 15 283 MYB Transcription Factor Family AT2G31180 45.588 1.24e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac7g02856 Myb_DNA-binding 9.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02856 K09422 - gmx:106794951 326.635