Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02849 ATGGATTTTGATTCATCTTTCTTCCAGTACCAAAGCCTTAACACTCCCTTTCTAAATTCTTCTTTGTGTGCAGAACCATTCCATTGGGAGGACTTTTTTCTCTTCAATGAAGAAAACACCACCACCCTTGATGATAATCCCTTCACCTTCAGTGACCACTCACAAATCAAGGAATCATCCTCGGATTCCAACTCTTCAGGCTCTTTGGTCAGCAGTGAGTCACAGCTGGAAGTGTCCTCCAATTTAACTCATGCAAGGCAAGGCCAAGTGCCCCAAGAAGCAGATGCATCAGCCCTTCCAAAGGAGAGCATCAAAGAGAAGAGACCCTTTAGGGGAGTGAGGAGAAGGCCATGGGGGAAATTTGCTGCTGAGATAAGAGACTCCACAAGAAATGGGGTTAGAGTGTGGATTGGAACATTTGACACAGCAGAGGCTGCAGCACTAGCCTATGACCAAGCAGCTTTGTCAACAAGAGGTTCCATGGCAGTGCTGAACTTCCCAGAAGAAGTGGTGAGGGAATCACTCAAAGACATGGCCAACAAGCCATGGGAAGATGGTTCCTCACCAGTGTTGGCACTCAAGAGGAAACACACCATGAGAAGGAAGTCCAAAGCCACAAACAAAAAGGCCAAAAGGGAGCACCATGGAATGGAGTTGGAGAATGTGCTTTCACAAAATGTGTTGGTGTTGGAGGATTTGGGCTCTGAGTACTTGGAACAACTTCTCAGCTTAACTTCTTCTTCTTCTTCTTCTGATCATTTGCTTTGCTAG 771 0.4604 MDFDSSFFQYQSLNTPFLNSSLCAEPFHWEDFFLFNEENTTTLDDNPFTFSDHSQIKESSSDSNSSGSLVSSESQLEVSSNLTHARQGQVPQEADASALPKESIKEKRPFRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEEVVRESLKDMANKPWEDGSSPVLALKRKHTMRRKSKATNKKAKREHHGMELENVLSQNVLVLEDLGSEYLEQLLSLTSSSSSSDHLLC* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02849 256 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Phac7g02849 256 PRINTS Ethylene responsive element binding protein signature 133 149 IPR001471 GO:0003700|GO:0006355
Phac7g02849 256 SUPERFAMILY DNA-binding domain 110 168 IPR016177 GO:0003677
Phac7g02849 256 CDD AP2 110 168 IPR001471 GO:0003700|GO:0006355
Phac7g02849 256 Gene3D AP2/ERF domain 109 169 IPR036955 GO:0003700|GO:0006355
Phac7g02849 256 PANTHER DNA-BINDING DOMAIN 66 247 IPR044808 GO:0003700|GO:0009873
Phac7g02849 256 FunFam Ethylene-responsive transcription factor 2 108 168 - -
Phac7g02849 256 ProSiteProfiles AP2/ERF domain profile. 109 167 IPR001471 GO:0003700|GO:0006355
Phac7g02849 256 Pfam AP2 domain 110 159 IPR001471 GO:0003700|GO:0006355
Phac7g02849 256 SMART rav1_2 109 173 IPR001471 GO:0003700|GO:0006355
Phac7g02849 256 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02849 Phac-Chr7 32185609 32186848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02849 89 250 AP2-EREBP Transcription Factor Family AT3G23240 55.357 1.26e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac7g02849 AP2 2.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02849 K14516 - gmx:100784784 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02849 7 32185609 32186848 Phac7g02849 7 32185609 32186848 ECH