Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02847 ATGACTTCCCCTTTCATCCAGAACCAAGACTGGGACATCTCGAATGAGCCCCCAGAAATTTTGTTCAATTCTTTGCCAAGAAATGCTGTTCTTGACCCTATTCACGATTCTCTTTCCTTCGATATGGTTGATTTCTCCAGGGCACAAGCACAAGGAAATCACAACCAATTGGTGGTGAAGACTGAAGAAGTGGAGAATAAGGAGAGGTCGTACAAAGGTGTGAGGAAAAGGCCTTGGGGAAAATATGCAGCAGAGATCAGAGACACAACCAGGAATGGCACAAGGGTTTGGCTTGGAACCTTTGACAGTGCAGAAGCTGCTGCGTTAGCTTATGACCAAGCTGCATTCTCCATGAGAGGCCATAATGCTGTGCTCAATTTTCCAGTGAAAAGGGTGAAAGAGTCTTTGCAGGAGATCCAATATAGCTGCTTCAGTGGTTCTTCTCCCGCACTTGCACTCAAGGAGAGGCACTGCATCCAAAGAAAGTTGTCATCAAAAGCTAAAAAGTTTAAAGGGAAAGACACATCAGAGGATCCAACACAAAGTGTGGTGGTGTTAGAGGATTTGGGAGTTGACTATTTAGAACATCTTCTAAGCATATCCGATCAAAGTCAAAGCCCTAGCTGCTTCGAGTAA 636 0.4465 MTSPFIQNQDWDISNEPPEILFNSLPRNAVLDPIHDSLSFDMVDFSRAQAQGNHNQLVVKTEEVENKERSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSAEAAALAYDQAAFSMRGHNAVLNFPVKRVKESLQEIQYSCFSGSSPALALKERHCIQRKLSSKAKKFKGKDTSEDPTQSVVVLEDLGVDYLEHLLSISDQSQSPSCFE* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02847 211 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Phac7g02847 211 PRINTS Ethylene responsive element binding protein signature 71 82 IPR001471 GO:0003700|GO:0006355
Phac7g02847 211 PANTHER DNA-BINDING DOMAIN 53 202 IPR044808 GO:0003700|GO:0009873
Phac7g02847 211 SUPERFAMILY DNA-binding domain 71 129 IPR016177 GO:0003677
Phac7g02847 211 ProSiteProfiles AP2/ERF domain profile. 70 128 IPR001471 GO:0003700|GO:0006355
Phac7g02847 211 SMART rav1_2 70 134 IPR001471 GO:0003700|GO:0006355
Phac7g02847 211 Pfam AP2 domain 71 121 IPR001471 GO:0003700|GO:0006355
Phac7g02847 211 CDD AP2 71 129 IPR001471 GO:0003700|GO:0006355
Phac7g02847 211 Gene3D AP2/ERF domain 70 130 IPR036955 GO:0003700|GO:0006355
Phac7g02847 211 FunFam Ethylene-responsive transcription factor 2 69 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02847 Phac-Chr7 32112948 32113583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02847 57 204 AP2-EREBP Transcription Factor Family AT3G23240 56.757 6.08e-55 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac7g02847 AP2 2.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02847 K14516 - gmx:100812017 334.724