Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02846 ATGACTTCTCCTTTCTTTCAGAGCCCTTATTGGGACATGATCATGGAGATGCCAGAGCCTTCAGAAATTTTGTTCCAATCATTGTCAACCAATGATGTTCTTGACCCTCTACACGATTCTCTTTCCTTCGACATGGTTGACTTCTCCACAGCACCAACAGAAGGAAGCCACAACGAGGCAAAGCAATTGGTGGTGGAGTCTCAAGAGCAGAATAGGGAAAGGTCATACATAGGTGTGAGGAAAAGGCCTTGGGGAAAATTTGCTGCAGAAATCCGAGACACAACCAGAAGGGGCACAAGGGTTTGGCTTGGAACCTTTGACAGTGCAGAAGCTGCTGCATTAGCTTATGACCAAGCTGCATTTTCCATGAGAGGCCATAGTGCTGTACTCAATTTTCCTGTCAAAAGGGTTAAAGAATCTTTGCAAGAGATCCAATATAGCTGCTTCAGTGGGTGTTCTCCTGCACTTGCACTCAAGGAGAGGCACTGCAAGCAAAAACACTTATCAAAAGCTAAAAAGTGTAAAGGGAAAGAGAAATCAAATTCAAATGTGGTGGTGTTAGAAGATTTGGGAGTTGACTACCTAGAGCAACTTCTAACCATATCCGATCAAAGTGCAAGCCCTAGCCACTTCAACTAA 639 0.4413 MTSPFFQSPYWDMIMEMPEPSEILFQSLSTNDVLDPLHDSLSFDMVDFSTAPTEGSHNEAKQLVVESQEQNRERSYIGVRKRPWGKFAAEIRDTTRRGTRVWLGTFDSAEAAALAYDQAAFSMRGHSAVLNFPVKRVKESLQEIQYSCFSGCSPALALKERHCKQKHLSKAKKCKGKEKSNSNVVVLEDLGVDYLEQLLTISDQSASPSHFN* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02846 212 SUPERFAMILY DNA-binding domain 76 134 IPR016177 GO:0003677
Phac7g02846 212 ProSiteProfiles AP2/ERF domain profile. 75 133 IPR001471 GO:0003700|GO:0006355
Phac7g02846 212 Pfam AP2 domain 76 126 IPR001471 GO:0003700|GO:0006355
Phac7g02846 212 Gene3D AP2/ERF domain 75 135 IPR036955 GO:0003700|GO:0006355
Phac7g02846 212 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Phac7g02846 212 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Phac7g02846 212 CDD AP2 76 134 IPR001471 GO:0003700|GO:0006355
Phac7g02846 212 SMART rav1_2 75 139 IPR001471 GO:0003700|GO:0006355
Phac7g02846 212 PANTHER DNA-BINDING DOMAIN 57 203 IPR044808 GO:0003700|GO:0009873
Phac7g02846 212 FunFam Ethylene-responsive transcription factor 2 74 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02846 Phac-Chr7 32083759 32084683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02846 73 207 AP2-EREBP Transcription Factor Family AT3G23240 60.000 1.52e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g02846 AP2 3.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02846 K14516 - gmx:100782036 316.235