Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02840 ATGGAGAAATGCTCGATGGCCGCGTCTCCTTCTCGCAAAGGCAGATCCAAGAAACCCAATGTCCCAAGCTCCAAGCTCCAATCGCCAGACCCTGTTGGCTTCGCCTCTCAGACGCCGGAGAAACCGCCGCAGCGGATCCGTAACCGCGGTGTCGCGCTCTCCATAGCTGACATAAGAAAAGTCGGCAAAGGGTTGCAGGAAATGAACCGACGCAGTGAAGCGACGTCGTCGCAGCAGAGCAAGAGTGTGAGGAGACAGATCTCACTGTGGCCTTCTTCTCCCAGTAAATCCAAGATTACTGAGGATGAATCCTCCAAACTTCCTGAAAAATATGAGATTTTGGATCAGTTCTTCGATCGTTTGGATACTTTGATTTCTATGTTCCGCCTGAAAGGGAAGACTCCATCCTTTACAGAGATCAGTTCTAGAATTGAATCTTTAACTGACAGGAGGTTTACTCATGGGCATCTAGCCCAATTGAAATACATCTTACCTGAGGCTATTGTTCTTAAGAAGTTTCTTGTGCATGACGAACGGACTTGTTGTATGAAGCCCGATATTCACATTTCTTTAAACCCCGAGGCGGTAGAGTCTGATTCGAGAGTACAACGTAGGAGAGTGTCGTTAAAGAAGTTGTTTCAGGCGCGACTAAGGGATTTTTGGGAATCTCATCCCAATGGTGATGAAATTCCAGAAGGAACATTGCCTGAGCCATTCAATCGCCCGAAGAAAGATAATATTTTGGACATGTTGGAAACTCGTCTCCCAACAAAATTGTCAACCTGCATGCGCTACATTGACATTGTCAATAATACAGAGTCTGCTGACATAGATGAAAAATTGTTGGTACCTATCAAGACATCAGTTGAGTTGACTAATGAACATCTGACAGCACCTTCTCACATTGCTCCATCCTATAGAGCTCGATTCTCTTTGAAATGTAAACTAGATGGAGCAGATGATATACAACAAAATTCTGCATTAGATTCATTACAACCTTCCCCATCCGATTTGGCGTCGGAAGCAACTAGTACTGTAAATTGTCCAACAAGTTGCGCTTCTCTGGAATCATCCAGTGCTCCCCTTGCTACTCCAATCAAATCCATTGAGAACACAGAAAACGAAGATGGGGCTTTCACCAGCATTGGTGCCCTCTCAACTCCCACTAGAAAAACATTTTTGGACACAGGAAACAAATATGAGTCTCCCACCATTGATGCGTTCTCAACTCCAGCCAGAGAAATCATTGAATACACAGTAAACAAAGATGGTTCTCCAAAAATCATTGATGCCATGTCAACACCAACCAAACTTATTTCTACTCCAAGGTTGATGAGTGCCACACCTGCATTGTCTTCACCCAAAAGACATTATATGAGCCCAGATGACCACCCTATCAGTTCTTTGAACAAGTTAGCTAGGCGACCACCTCGGTCAAGGTCATTGAAATTCGACACCCCAGTGAAGAACAAGGAGGCTGTGAATGAAGGCAATGGTGGTGCCTTACCAATAGATAATGACGTTTTTGACATCCTCCCTGGAAAACTTATCCAATCGATTAGAGAAAAGGAAAGAATAGCGATGGAGGAAAGAGACCCAGATATTACTCGAGCAAAGAAAAGGAAAAAAATAATAGCTAACCTCCCTAGGCTCTTTGATATGATTCGCCTCTTGCTTCGACAGCGTAATTGTATCACTAAAGATGAGCTTGTAATGAAGATAATTTCAAGCCACAGCGATATTGTGGACAGAAGTGAAGTGGAAGAGCAGCTAAGCTTGCTGCAAGAATTAGCACCCGAATGGATTTCTGAGAAGCAGGTCTCTAGTGGAGATTTTCTATTCTTCATAAACAAAATGTTGAGCGCTGAAACCATTCGGGCATCTCTTGAAGAAGCAACATAG 1902 0.438 MEKCSMAASPSRKGRSKKPNVPSSKLQSPDPVGFASQTPEKPPQRIRNRGVALSIADIRKVGKGLQEMNRRSEATSSQQSKSVRRQISLWPSSPSKSKITEDESSKLPEKYEILDQFFDRLDTLISMFRLKGKTPSFTEISSRIESLTDRRFTHGHLAQLKYILPEAIVLKKFLVHDERTCCMKPDIHISLNPEAVESDSRVQRRRVSLKKLFQARLRDFWESHPNGDEIPEGTLPEPFNRPKKDNILDMLETRLPTKLSTCMRYIDIVNNTESADIDEKLLVPIKTSVELTNEHLTAPSHIAPSYRARFSLKCKLDGADDIQQNSALDSLQPSPSDLASEATSTVNCPTSCASLESSSAPLATPIKSIENTENEDGAFTSIGALSTPTRKTFLDTGNKYESPTIDAFSTPAREIIEYTVNKDGSPKIIDAMSTPTKLISTPRLMSATPALSSPKRHYMSPDDHPISSLNKLARRPPRSRSLKFDTPVKNKEAVNEGNGGALPIDNDVFDILPGKLIQSIREKERIAMEERDPDITRAKKRKKIIANLPRLFDMIRLLLRQRNCITKDELVMKIISSHSDIVDRSEVEEQLSLLQELAPEWISEKQVSSGDFLFFINKMLSAETIRASLEEAT* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02840 633 MobiDBLite consensus disorder prediction 64 104 - -
Phac7g02840 633 MobiDBLite consensus disorder prediction 1 52 - -
Phac7g02840 633 MobiDBLite consensus disorder prediction 16 34 - -
Phac7g02840 633 FunFam CDT1-like protein a chloroplastic 505 633 - -
Phac7g02840 633 PANTHER DNA REPLICATION FACTOR CDT1 6 632 IPR045173 GO:0003677|GO:0030174|GO:0071163
Phac7g02840 633 Pfam DNA replication factor Cdt1 C-terminal domain 516 607 IPR032054 -
Phac7g02840 633 MobiDBLite consensus disorder prediction 451 483 - -
Phac7g02840 633 Gene3D - 506 633 IPR038090 -
Phac7g02840 633 Pfam DNA replication factor CDT1 like 107 200 IPR014939 -
Phac7g02840 633 SUPERFAMILY "Winged helix" DNA-binding domain 103 239 IPR036390 -
Phac7g02840 633 CDD Cdt1_c 506 630 IPR032054 -
Phac7g02840 633 MobiDBLite consensus disorder prediction 69 98 - -
Phac7g02840 633 SMART CDT1_2 107 237 IPR014939 -
Phac7g02840 633 CDD Cdt1_m 91 258 IPR014939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02840 Phac-Chr7 32039972 32043263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02840 424 631 Core DNA Replication Machinery Family AT2G31270 45.374 8.85e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02840 K10727 - gmx:100778818 750.74