Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02828 ATGGCTTCTGCAACAACTGCAAATGACGCTGCTTCTGCTTCTTCCTTTGGATCTCCCTGCGGGGCATGCAAGTTCCTGCGAAGAAAATGCGCTGCAGACTGCATCTTTGCACCCTACTTTTGCTCCCAACAAGGACCTGCTAGATTCGCAGCCATTCATAAGGTTTTCGGGGCTAGCAACGTTTCCAAGTTGCTCTTGCGTATACCAGATAACGATCGTTTTGAGGCAATGGTCACAATCGCTTACGAAGCCCAAGCTCGCATCAGAGACCCTGTTTACGGTTGTGTCTCCCATATATTCGCCTTGCAGCAACAGGTAGCAAGCCTGCAGGCAGAGCTAGTGCAAATGAAGGCACAGCTGGATCAGAACCAGATGGTTTGTAGGAACTTGGAGAATCATTGGTCTGAGAATGTTGGACAACCATTGAATCCATTGTGTCCCACTTCCATGGATAACCCTATTTCTCCTCAGAGCTCACTTGATTCAATTGATTACAGCAGCAGTATGAATGATGGAATGAGCATGCAAGATGTACAAAGCGGAGAGGATTTCTCATTCCAAGCTTGTTCTTGGAAAAGATCATATAACAATGACTTGGGTGAGCTGCAAGAATTGGCACTCAGGATGATGAGGAAGTGTGATTAG 645 0.4667 MASATTANDAASASSFGSPCGACKFLRRKCAADCIFAPYFCSQQGPARFAAIHKVFGASNVSKLLLRIPDNDRFEAMVTIAYEAQARIRDPVYGCVSHIFALQQQVASLQAELVQMKAQLDQNQMVCRNLENHWSENVGQPLNPLCPTSMDNPISPQSSLDSIDYSSSMNDGMSMQDVQSGEDFSFQACSWKRSYNNDLGELQELALRMMRKCD* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02828 214 Coils Coil 99 126 - -
Phac7g02828 214 ProSiteProfiles LOB domain profile. 18 120 IPR004883 -
Phac7g02828 214 PANTHER LOB DOMAIN CONTAINING PROTEIN 15 173 - -
Phac7g02828 214 Pfam Lateral organ boundaries (LOB) domain 19 117 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02828 Phac-Chr7 31939816 31941201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02828 1 211 AS2 family AT2G42430 49.799 9.72e-72 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac7g02828 LOB 9.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02828 K13944 - gmx:100776145 315.464