Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02824 ATGGAATTCAGCTGCCAAGAAGATTATTCCAAAAGCTCCAGCGAAGAAATTGATCGATCATCTGAACAGAATGATGAGATGGGCACTGGCAGATCCTACGAGTGTGTCTTTTGCAAGAGAGGCTTCACCACTGCACAGGCTTTGGGTGGACACATGAACATACACAGAAAAGATAGGGCCAACAAGGCCAAACCCAATTTTCCTCCTTCCACTTCAACCAAGGTTGATGACAGTAATAGCTATGCAGATCTCGGCTTATACTCACCATCATCCAATACAACCTATCTTGCAAGAGGGAGTTACTATTCCACTCTTCCTGATCCAGAGGTAGACATTAATTACAACTACTACCATCAATTATATTTTCCCTCACACGCTTGTGCTGCCAAATCACCTTCACATCTACAATACAGTGAGGTTTTGTGTCTAGAGAACCAAAGGGATCCTCAACTTCTCTTTGGACAAGATTGGAGACAAAGGGGTTTGAGTCTCTACACCAATCCACTATGTGCACGTCAAAATAAAGACAAGACACAAAACAACACTGAAGAGGACGATCTGGATTTGGAGCTTAGACTTGGTCATCATCCATAG 594 0.431 MEFSCQEDYSKSSSEEIDRSSEQNDEMGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRANKAKPNFPPSTSTKVDDSNSYADLGLYSPSSNTTYLARGSYYSTLPDPEVDINYNYYHQLYFPSHACAAKSPSHLQYSEVLCLENQRDPQLLFGQDWRQRGLSLYTNPLCARQNKDKTQNNTEEDDLDLELRLGHHP* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02824 197 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Phac7g02824 197 MobiDBLite consensus disorder prediction 65 81 - -
Phac7g02824 197 MobiDBLite consensus disorder prediction 9 25 - -
Phac7g02824 197 MobiDBLite consensus disorder prediction 173 197 - -
Phac7g02824 197 SUPERFAMILY beta-beta-alpha zinc fingers 31 60 IPR036236 -
Phac7g02824 197 MobiDBLite consensus disorder prediction 177 197 - -
Phac7g02824 197 MobiDBLite consensus disorder prediction 57 81 - -
Phac7g02824 197 Gene3D Classic Zinc Finger 7 84 - -
Phac7g02824 197 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Phac7g02824 197 MobiDBLite consensus disorder prediction 1 28 - -
Phac7g02824 197 PANTHER OS07G0101800 PROTEIN 10 196 - -
Phac7g02824 197 Pfam C2H2-type zinc finger 33 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02824 Phac-Chr7 31890483 31891290 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02824 33 65 C2H2 Transcription Factor Family AT5G43540 84.848 2.29e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g02824 zf-C2H2_6 1.8e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02824 - - gmx:102670484 303.523