Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02817 ATGATGAGTGAGAAGTTTTGTCTGAACGAAGAAGACAAGGGTGTGTTGGAGTCTGTGTTGGGCGCAGAGGCTGTTGCGTTTTTCATTTCAGCACTTTCCAATAATGTCTTTTCCAGCGTTGTTACTCCTTCGGCCGGTGCTGACTCGTCCCTCCGTCAGAGGTTGTGCCAGCTTGTTGAGGGTTCCAAGTGGAACTATGCAGTGTTTTGGCAAGTTGCTGGCTTGAAATCTGGTGGTTCTGCGTTGATTTGGGGTGATGGGCATTGCAGTGATCCCAAAGGGAAAAGGAGTGTTGGGAAGGAGGATGAGCAGGAGGTGAGAAAGATGGTGCTGCAGAAGCTTGATGCCTGCTTTGGTGGGTGTGTCTCGAAAGAGGCTAACTATGCAAGATTGGATAGGTTGTCTGATTTGCTCATGTTTTACTTATCCTCGATGTGTTATATATTCGGTTTTGATTCGCCATGTGGCCCTGGGAGTTCATTCAAATCTGCTAAATTAATTTGGACATCTGATGCTGCTGGTTGTTTAAATCAATTAGAATCTAGATCATTTCTAGGGAAAGTAGCTGGTCTTCAAACTGTTGTTTTTGTTCCTCTGAAATTTGGGGTGGTGGAGCTTGGTTCGAATGAAGTGGTGTCTGAAGAACAGGGTTTTGTGGAGATGATTAAGACAGCATTTGGGGAATCCAGTCCCGGACAGGTTAAGGTATTTCCGAAGATTTTTGGGCACGAGTTAAGCCTGGGGGATGCAAAATCTCAGTCTATAACTATTAGTTTCTCCCCGAAGGTGGAAGATGATCCTGGTTTTACTTCAGACTCCTTTGAAGTTCAAGCACTGGGGGTGAACCATACTTACGGAAATTCTTCCAATGGGACTTTAGGGGACAGTAGTGAAGGGAAAATGTTCCCTCAATTGAACCAAATGATGGGTGGGAATTTTAATGCTCAAGCAAGGGTTCCTTGTCTAGATCTCGGTAATGAAGACACGTCCTCAATTCATGCAGATGAGCGGAAGCCCAGAAAAAGAGGTAGAAAACCTGCCAATGGGAGAGAGGAACCTCTGAATCATGTTGAAGCAGAGAGACAAAGACGTGAGAAGCTTAACCAGAGGTTTTATGCCTTAAGAGCTGTTGTCCCCAATATATCTAAAATGGACAAGGCATCTTTGCTTGGTGATGCCATTACTTTCATCACCGATCTCCAGATGAAGATCAAAGTGTTGGAAGCTGAGAAGAACATGTTTAACAACAAGGACCTGAGGTTATCCTTGCCAGATATGGATTTTCAGGAAAGAGAGGATGACACAGTTGTGACAGTGAGATGCCCTTTAGATGCTCACCCTGTTTCGGATGTTGTTAAAACTTTCAGGGAGCATCAAATTGTGGCTCAAGACACCAATGTTTCTACTACAGATGATAAAATCATTCATACATTCTCCATAAGAACTGAGGGAGGGGAGGCTGCTGCCATTCAGTTGAAAGAAAAGCTTGAAGCGGCCCTATCCAAAACTTTACCCTGA 1518 0.444 MMSEKFCLNEEDKGVLESVLGAEAVAFFISALSNNVFSSVVTPSAGADSSLRQRLCQLVEGSKWNYAVFWQVAGLKSGGSALIWGDGHCSDPKGKRSVGKEDEQEVRKMVLQKLDACFGGCVSKEANYARLDRLSDLLMFYLSSMCYIFGFDSPCGPGSSFKSAKLIWTSDAAGCLNQLESRSFLGKVAGLQTVVFVPLKFGVVELGSNEVVSEEQGFVEMIKTAFGESSPGQVKVFPKIFGHELSLGDAKSQSITISFSPKVEDDPGFTSDSFEVQALGVNHTYGNSSNGTLGDSSEGKMFPQLNQMMGGNFNAQARVPCLDLGNEDTSSIHADERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITFITDLQMKIKVLEAEKNMFNNKDLRLSLPDMDFQEREDDTVVTVRCPLDAHPVSDVVKTFREHQIVAQDTNVSTTDDKIIHTFSIRTEGGEAAAIQLKEKLEAALSKTLP* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02817 505 MobiDBLite consensus disorder prediction 325 355 - -
Phac7g02817 505 SMART finulus 357 406 IPR011598 GO:0046983
Phac7g02817 505 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 51 226 IPR025610 -
Phac7g02817 505 PANTHER MYC 41 499 IPR045084 GO:0003700|GO:0006355
Phac7g02817 505 CDD ACT_UUR-ACR-like 435 504 - -
Phac7g02817 505 Pfam Helix-loop-helix DNA-binding domain 355 401 IPR011598 GO:0046983
Phac7g02817 505 Gene3D - 344 417 IPR036638 GO:0046983
Phac7g02817 505 MobiDBLite consensus disorder prediction 329 355 - -
Phac7g02817 505 Coils Coil 397 417 - -
Phac7g02817 505 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 351 400 IPR011598 GO:0046983
Phac7g02817 505 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 417 IPR036638 GO:0046983
Phac7g02817 505 CDD bHLH_AtAIB_like 348 411 - -
Phac7g02817 505 FunFam Transcription factor bHLH13 344 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02817 Phac-Chr7 31778554 31780935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02817 2 502 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 46.746 3.90e-152 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g02817 bHLH-MYC_N 1.3e-41 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02817 - - gmx:100819968 901.353