Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02796 ATGAAGATGGTAGAGTATGGATCGGGAAGTATCTCTTGTCCGTTCAATTGCACAAAAGGAGAAAAGAACAGTATAATTATTCTGGAATGTTTCACCTGTGATGGAAAGAAAACCTCAAGCAGTGGCTTCTCTGTGGAAGATAAGGACATTGGATATAGAGCTGCAACATCAACACATACATATCTTTTGGACAACAAATCTGCCCTCCACTTTTTTTCCATCAAAATTGACCTGAATTATGCTCGCATGGCAATGGCAGAGATGGTGGGTACTTTTATTTTGATGTTCTGTGTATGTGGAATCAGTGCAAGCACACAATTCCAAAAGGGTGCAGTGGGGCTTCCGGAGTATGCAGCTACAGCAGGGTTAACAGTGGTGGTGATAATTTTCTCTATAGGGCCAATATCTTGTGCGCACGTTAACCCAGCTGTCACAATAGCCTTTGCAACAATGGGTCAATTTCCATGGTTCAAGGTTCCAGTTTACATAATAGCACAGATAGTAGGTTCTATGTCGGCAGCATACATAGGTTGCCTTGTATACGGCATAAAATCAGATGCTATCATGACCATGCCACTCCAAGGGTGCACCTCTGCCTTCTGGGTGGAGCTTATTGCAACTTTCATCATCATGTTCCTAGTTGCAGCTTTGACATCTGAATCTCAATCAGTGGGCCATTTATCTGGCTTTGTTGCTGGTATAGCAATTGGCCTTGCTGTGCTAATCACAGGGCCAGTCTCAGGTGGATCAATGAATCCTGCAAGATCATTAGGTCCAGCAATTCTCTCATGGAAGTTTAAGAACATATGGATATACATGGTGGCTCCCAGTGGTGGAGCAGTGGCAGGAGCGGCAATGTTTCGTTTCTTACGCCTTCGAGACCAACATTCTACTACTTTGTCCTCCCCAAACATCAGTGCTGCTGGTCGTCCCATACCCTTTTGCTCAAGGAGAAGTGGGCCCATGATTTTGCTGGTAGAGAAAAATCGGAGTTTGTTCTCTGAAAGAGTAGAAATGTTCAGACAAAGATATGTCTTAGGAACAAAAATATCAGATGGTGTCTATCGTAAATTGCCACTGTAG 1083 0.4358 MKMVEYGSGSISCPFNCTKGEKNSIIILECFTCDGKKTSSSGFSVEDKDIGYRAATSTHTYLLDNKSALHFFSIKIDLNYARMAMAEMVGTFILMFCVCGISASTQFQKGAVGLPEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATMGQFPWFKVPVYIIAQIVGSMSAAYIGCLVYGIKSDAIMTMPLQGCTSAFWVELIATFIIMFLVAALTSESQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAILSWKFKNIWIYMVAPSGGAVAGAAMFRFLRLRDQHSTTLSSPNISAAGRPIPFCSRRSGPMILLVEKNRSLFSERVEMFRQRYVLGTKISDGVYRKLPL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02796 360 ProSitePatterns MIP family signature. 139 147 IPR022357 -
Phac7g02796 360 Pfam Major intrinsic protein 80 286 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02796 360 PANTHER AQUAPORIN NIP2-1 74 296 IPR034294 -
Phac7g02796 360 Gene3D Glycerol uptake facilitator protein. 46 302 IPR023271 -
Phac7g02796 360 PRINTS Major intrinsic protein family signature 270 290 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02796 360 PRINTS Major intrinsic protein family signature 121 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02796 360 PRINTS Major intrinsic protein family signature 202 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02796 360 PRINTS Major intrinsic protein family signature 82 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02796 360 PRINTS Major intrinsic protein family signature 158 177 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02796 360 PRINTS Major intrinsic protein family signature 233 255 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phac7g02796 360 SUPERFAMILY Aquaporin-like 78 296 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02796 Phac-Chr7 31699759 31710779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02796 85 295 Major Intrinsic Protein MIP AT5G37820 41.038 2.10e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02796 K09874 - gmx:100817660 417.157