Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02786 ATGGAGGACGTTGAAACTGAGGTGAGTCAAGCAGTGCCGAAGAAGAGGACCTTCAAGAAGTTCAGTTTCCGAGGCGTCGATCTCGATGCTCTGTTGGACATGTCCACAGATGAACTCGTCAAGCTCTTCACTGCACGCGCACGCAGAAGATTTCAGCGCGGTTTGACCCGCAAACCTATGGCTCTAATCAAGAAGCTTCGTAAGGCGAAACGGGAGGCTCCAGCTGGTGAGAAGCCAGAGCCGGTGAGGACCCACCTCCGCAACATGATCATCGTGCCCGAGATGATTGGGAGCATCATTGGTGTTTACAATGGGAAAACTTTCAATCAAGTTGAAATTAAGCCGGAAATGATTGGGCATTATCTTGCTGAGTTTTCAATCTCTTACAAGCCTGTTAAGCATGGAAGGCCTGGTATAGGTGCCACCCACTCCTCTAGGCCAATCAACACGGAATGA 456 0.5 MEDVETEVSQAVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRPINTE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02786 151 Gene3D 30s Ribosomal Protein S19; Chain A 8 150 IPR023575 GO:0003735|GO:0005840|GO:0006412
Phac7g02786 151 PRINTS Ribosomal protein S19 family signature 116 131 IPR002222 GO:0003735|GO:0005840|GO:0006412
Phac7g02786 151 PRINTS Ribosomal protein S19 family signature 84 103 IPR002222 GO:0003735|GO:0005840|GO:0006412
Phac7g02786 151 PRINTS Ribosomal protein S19 family signature 104 116 IPR002222 GO:0003735|GO:0005840|GO:0006412
Phac7g02786 151 NCBIfam 30S ribosomal protein S19 18 148 IPR005713 GO:0003735|GO:0006412|GO:0015935
Phac7g02786 151 Hamap 30S ribosomal protein S19 [rpsS]. 47 140 IPR002222 GO:0003735|GO:0005840|GO:0006412
Phac7g02786 151 FunFam 40S ribosomal protein S15 8 150 - -
Phac7g02786 151 ProSitePatterns Ribosomal protein S19 signature. 104 128 IPR020934 GO:0003723
Phac7g02786 151 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 5 150 IPR002222 GO:0003735|GO:0005840|GO:0006412
Phac7g02786 151 Pfam Ribosomal protein S19 49 134 IPR002222 GO:0003735|GO:0005840|GO:0006412
Phac7g02786 151 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 10 149 IPR002222 GO:0003735|GO:0005840|GO:0006412
Phac7g02786 151 SUPERFAMILY Ribosomal protein S19 54 135 IPR023575 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02786 Phac-Chr7 31607906 31613181 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02786 1 148 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 85.811 2.08e-88 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02786 K02958 - rcu:8280171 276.559