Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02777 ATGACGATGAAGAGGCTGGCGAGAGTGAAGAGGGATGCGATTGCAGCATGCATGACTTGCCCGCTTTGCAACAAGTTCCTCAAGGAGGCCACTGCCATTTCTCTTTGCCTTCATACGTTTTGCAGGAAGTGCATTTATGATAAAATTACAGAAGAAGAATTGGAAAATTGTCCAGTATGCAACATTGATTTGGGCATTGTTCCGCTAGAGAAAATGAGGCCAGATAACAGTTTGCAAGATTTAAGGAACAAAATTTTCCCTTTCAATAAAAGAAAGCAGAAGGCACCTGTAGCTATCCCCTCAGTACTATTACCAGCTAGAAGAAAGGAGAGATCACTTTCATCTTTGGTTGTCAGCACTCCAAGGGTATCTACACTGTCAACCATGACAGGAAGAAGAACAAAACCTACAAGAAAGGCACTAGGCCTGCAGGGATCTAATTTCTCTGTTGAAAAGCTCATTAAAAAAGAAGAGGAATTACTGGAAGATCGTCAAGATAGTTCATGCTCACCTGACGCTTCAAACAAGTCTGCAAAGAGTGCGGGACAGAGTTTGTCACCTTGTAAAAATAGTCAATCCATATGCAATAGAGGACCGCAGAATGGTGCTGAAACACAGGAAGCAAAATGGGATCTTTGGAAAACTTTGAATTATTTAGCAGAGGCTGCAAGTAGGAGTAAGTCTTTCAAGTCTAATGTGCAAGCGTCTAATGCTAAACCCGAATCCATGAAAGTAACTGACAGTGATACTAAAGTGCTGAAAGCCAAAATTAAGGAAAATAAACGCAAGGCAAAAGTTGAAGATGAAAAGATTAGCACTGATCATGCCTCTCTAGATACAGCAAAACCCAACAAATTGCGAAGAGTTCGCCCAAAAAAGGAACCTGTTTTTGGAGAATCTAGAATATCACCTCAGGCTGTTCTGGATGCTAATGACAGTAATCTCTTATGGAATGATTCAATTTGGTTCTCCTTAGCAGCTTCTGAAAACCAGGAAGGAGATGCACCTTTACCCCAAATTCCTTCAAGTTATGTAAGAATAAAGGACGGAAGCATACCGGTCTCATTTATCCAAAAATTGTTAGTGAAGAAACTGGGCCTGAAAAGTGAGGATGAGGTTGAGATTAAATGCATGGGACATCCTGTGCTTCCTTCACTACAGGTACAGAATTTAGTTGAATTGTGGCTTGATACGGCATCTACAGGGCACAGAATTCCTGCAACCATAGGATCCTCAGGGAAAGACTTTGTGATGATCCTAACCTATGGTCGGAAGGTCCTACATCCTTGA 1290 0.4147 MTMKRLARVKRDAIAACMTCPLCNKFLKEATAISLCLHTFCRKCIYDKITEEELENCPVCNIDLGIVPLEKMRPDNSLQDLRNKIFPFNKRKQKAPVAIPSVLLPARRKERSLSSLVVSTPRVSTLSTMTGRRTKPTRKALGLQGSNFSVEKLIKKEEELLEDRQDSSCSPDASNKSAKSAGQSLSPCKNSQSICNRGPQNGAETQEAKWDLWKTLNYLAEAASRSKSFKSNVQASNAKPESMKVTDSDTKVLKAKIKENKRKAKVEDEKISTDHASLDTAKPNKLRRVRPKKEPVFGESRISPQAVLDANDSNLLWNDSIWFSLAASENQEGDAPLPQIPSSYVRIKDGSIPVSFIQKLLVKKLGLKSEDEVEIKCMGHPVLPSLQVQNLVELWLDTASTGHRIPATIGSSGKDFVMILTYGRKVLHP* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02777 429 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 5 425 IPR044807 GO:0004842
Phac7g02777 429 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 101 IPR013083 -
Phac7g02777 429 CDD RING-HC_PCGF 18 61 - -
Phac7g02777 429 SMART ring_2 20 60 IPR001841 -
Phac7g02777 429 SUPERFAMILY RING/U-box 15 85 - -
Phac7g02777 429 Pfam Zinc finger, C3HC4 type (RING finger) 20 60 - -
Phac7g02777 429 MobiDBLite consensus disorder prediction 167 202 - -
Phac7g02777 429 ProSitePatterns Zinc finger RING-type signature. 36 45 IPR017907 -
Phac7g02777 429 ProSiteProfiles Zinc finger RING-type profile. 20 61 IPR001841 -
Phac7g02777 429 MobiDBLite consensus disorder prediction 162 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02777 Phac-Chr7 31561647 31567007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02777 1 348 C3H Transcription Factor Family AT2G30580 48.148 1.48e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02777 K16277 - gmx:100778462 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g02252 1 32178512 32185374 Phac7g02777 7 31561647 31567007 PCT