Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02739 ATGGATTATATGTATCCAGTGAAAGAAGAATACTTGGAATCATCACCACCATCATCATCATCATATCAATTAGGTAGTGAGTATCCACCAAAGCCAATTGAGGGACTTCGTGACACCGGACCACCACCATTCCTCACCAAAACTTTTGATGTTGTGGATGACCCAGTTACCAACCACGTAATTTCTTGGAGCAGAGACGGCACAAGCTTTGTGGTCTGGGATCCACATACCTTCTCTGCAAGTCTCCTTCCCAGATACTTCAAGCACAACAATTTCTCCAGCTTTGTCAGGCAACTAAACACTTACGGTTTTAGGAAAATTGATCCGGATAGATGGCAGTTTGCAAATGAAGGATTCATCAGAGGGCAGAAGCAATTGTTAAGAAGCATAAGGAGAAGGAAGGCACCTTCCCAACTAACGCAAGGTCACCACTGTGTTGAAGTTGGACGTTTTGAAATAGACAAAGAGGTTGATCGTTTGAAGCATGACAAGATAGTGTTGATGATGGAGCTTATGAATCTAAGACAGCAGCAGCAGAGAGCCAGAATGTACATTAAGGAGATGGAGCAAAGGTTACAAGTGACTGAAATCAAGCAGAAACATATGATGGCATTCTTAGCTAGAGCCATAAAAAATCCTGCCTTCCTACACCAACTCCAACAGAAGGAGAACAGAAAGGATCTTGAAGAAGCCTTGACCAAAAAGAGAAGGCAAATTGAGCAAGGAGCTAGAGGTATTGGAGAATCAAGTAGTGGGGGTGAAGAAAGGAGCAGTGTTAAAGTTGAGGCCTTAGAATTTGGGGATTGTGATTGTGATCTTGGAGTGTCAGAGTTGGAAATGTTAGCTATGGAAATGCAGGGGTTTGGACAGGGTAGGATAGACCGTGAGGTAGAACCTGAGGCACTAGAATCACAAGAGAGACTGGATAGAGTACTTGATGAAGAGTTTTGGGAAGAACTACTGATTAGTGAGAAATTTGAGGGTCGATTAGACATTCCAACTACTGAAGATAATGATGAAGATGTTGTCAATATATTGGCGAATGAACTTGGTGGCTTGTATTCAAGTCATTAA 1074 0.4227 MDYMYPVKEEYLESSPPSSSSYQLGSEYPPKPIEGLRDTGPPPFLTKTFDVVDDPVTNHVISWSRDGTSFVVWDPHTFSASLLPRYFKHNNFSSFVRQLNTYGFRKIDPDRWQFANEGFIRGQKQLLRSIRRRKAPSQLTQGHHCVEVGRFEIDKEVDRLKHDKIVLMMELMNLRQQQQRARMYIKEMEQRLQVTEIKQKHMMAFLARAIKNPAFLHQLQQKENRKDLEEALTKKRRQIEQGARGIGESSSGGEERSSVKVEALEFGDCDCDLGVSELEMLAMEMQGFGQGRIDREVEPEALESQERLDRVLDEEFWEELLISEKFEGRLDIPTTEDNDEDVVNILANELGGLYSSH* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02739 357 ProSitePatterns HSF-type DNA-binding domain signature. 83 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g02739 357 Coils Coil 218 238 - -
Phac7g02739 357 Gene3D - 37 134 IPR036388 -
Phac7g02739 357 MobiDBLite consensus disorder prediction 11 39 - -
Phac7g02739 357 SUPERFAMILY "Winged helix" DNA-binding domain 40 133 IPR036390 -
Phac7g02739 357 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 30 247 IPR027725 -
Phac7g02739 357 FunFam Heat shock transcription factor 1 37 134 - -
Phac7g02739 357 Pfam HSF-type DNA-binding 44 133 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g02739 357 Coils Coil 171 191 - -
Phac7g02739 357 SMART hsfneu3 40 133 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g02739 357 MobiDBLite consensus disorder prediction 239 258 - -
Phac7g02739 357 PRINTS Heat shock factor (HSF) domain signature 44 67 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g02739 357 PRINTS Heat shock factor (HSF) domain signature 82 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g02739 357 PRINTS Heat shock factor (HSF) domain signature 95 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02739 Phac-Chr7 31158388 31161742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02739 17 356 HSF AT3G22830 46.438 4.92e-107 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac7g02739 HSF_DNA-bind 4.6e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02739 K09419 - gmx:100811945 571.237