Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02725 ATGGAACAGTATGAAATTCTAGAACAGATTGGAAGAGGCTCCTTTGCTTCTGCTCTACTTGTCAGACACAGGCACGAAAACAAAAGGTATGTTCTTAAGAAGATCCGGCTTGCTCGCCAGACGGACAGAATACGCAGATCTGCTCACCAGGAGATGGAGCTTATCTCTAAAGTTCGAAACCCATTTATCGTGGAGTATAAAGATTCCTGGGTAGAAAAGGGTTGTTTTGTATGTATCGTCATTGGCTATTGTGAAGGAGGAGATATGACTGAAGCTATTAAAAAAGCCAATGGCGTACATTTTCCCGAAGAGAGGCTCTGTAAGTGGCTGGTTCAACTGCTGATGGCACTAGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGATATACGTCTAGGTGACTTCGGTCTAGCTAAAATGTTGACATGCGATGATCTTGCATCCTCGGTTGTTGGGACTCCAAGTTATATGTGCCCCGAACTTCTTGCTGATATACCCTATGGCTCTAAATCAGATATCTGGTCTTTGGGATGTTGTGTGTATGAAATGGCTGCTCACAAACCAGCTTTTAAAGCTCTTGATATGCAAGCACTGATTAACAAAATAAACAAGTCATTAGTGGCTCCACTACCAACAGTGTATTCTGGTTCTTTTCGGGGGCTCGTTAAGAGTATGCTGCGGAAGAATCCAGAGCTTCGGCCTAGTGCTGCAGAGTTACTAAATCATCCGCATCTTCAGCCTTACATTCTTAAAATTCACTTGAAATTAAATAACCCTAGAAGAAGTACTTATCCATTCCAATGGTCTGATTCAAACTATGTAAGAAGGACTCAGTTTGTTGAGCCAGATTCTGTTTCTACTCTTTCTGGTAGAGGCAAAAGATTGTCATTCAGCAATGACAGGGCATTGAATCCTAGTATATCTGGAACTGAAGTAGGTTCTGTGTGTTCTACTCAAAGAGGTCAAGGATTCTCTTGTTCAAAAGAGAAACACTATGAGCTCTCTGTTGGTTGTGTGCGTGAAGAATGCAATTGTAACAAGTCAAAAGACACAAAGTCCTCAACTGTTGATAGGATGCCAAGATTCAGAACAGCTAAGGAATATGCCACTCCCCGAAGGCAGACAATACCATCAAAGGCATCTCATACAGGTTCCAAGCGTGATTTACTTCCAGCATCTTCTACTCCAGGTGTTAAATTTACACCACCATCTCGCAGAGCTTCTCTTCCACTCCCTACCAAAACCATGTGTATGACCACCCCATATAGGGCTAATGTTGGTCTTCTCCGGGGCATGGACTCTCCTGATGTTTCTGTCAATGCACCGCGAATTGACAAGATTGCCGAATTCCCTCTAGCCTCTTGTCAGGATTCTCTCTTTCCTGTTTGTGGAACTTCATCAAATTCGGCTCAGTGTTCTTCTGGTTCCCCAAAGAGTGCCGACTGCTTAATCACGAAAGACAAGTGCACAATCCAAGTTGTGGACAAAGTCAGTGTCCCTTCAAGTGTACAATCCCCAAAGGGTGCTGCTCCAGTTTCACAAGGCAATGAATGCTCTGAGCATGCTGTTTCAAGTCTCTTCTCGGCCGAGTCTTGCCAACGCAGGTTTGACCCCTCGTCTTACCAGCAACGTGCGGAGGCATTGGAGGGTTTGCTTGAGTTCTCTGCTCGGCTCCTACAGCAACAGAGGTTTGAAGAGCTTGGAGTGTTGTTGAAGCCATTCGGTCCTGAGAAGGTTTCCCCAAGAGAGACAGCTATTTGGTTGGCTAAGAGCTTCAAAGAAACTGTTGCCTAA 1833 0.4392 MEQYEILEQIGRGSFASALLVRHRHENKRYVLKKIRLARQTDRIRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIVIGYCEGGDMTEAIKKANGVHFPEERLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDIRLGDFGLAKMLTCDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFKALDMQALINKINKSLVAPLPTVYSGSFRGLVKSMLRKNPELRPSAAELLNHPHLQPYILKIHLKLNNPRRSTYPFQWSDSNYVRRTQFVEPDSVSTLSGRGKRLSFSNDRALNPSISGTEVGSVCSTQRGQGFSCSKEKHYELSVGCVREECNCNKSKDTKSSTVDRMPRFRTAKEYATPRRQTIPSKASHTGSKRDLLPASSTPGVKFTPPSRRASLPLPTKTMCMTTPYRANVGLLRGMDSPDVSVNAPRIDKIAEFPLASCQDSLFPVCGTSSNSAQCSSGSPKSADCLITKDKCTIQVVDKVSVPSSVQSPKGAAPVSQGNECSEHAVSSLFSAESCQRRFDPSSYQQRAEALEGLLEFSARLLQQQRFEELGVLLKPFGPEKVSPRETAIWLAKSFKETVA* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02725 610 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Phac7g02725 610 Gene3D Transferase(Phosphotransferase) domain 1 84 272 - -
Phac7g02725 610 MobiDBLite consensus disorder prediction 387 403 - -
Phac7g02725 610 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 566 - -
Phac7g02725 610 MobiDBLite consensus disorder prediction 385 425 - -
Phac7g02725 610 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g02725 610 FunFam Serine/threonine-protein kinase Nek3 86 332 - -
Phac7g02725 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Phac7g02725 610 SUPERFAMILY Protein kinase-like (PK-like) 1 311 IPR011009 -
Phac7g02725 610 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g02725 610 CDD STKc_Nek 3 258 - -
Phac7g02725 610 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Phac7g02725 610 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g02725 610 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02725 Phac-Chr7 31090971 31097886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02725 10 289 MAP Kinase Kinase Kinase AT1G53570 29.000 8.79e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Phac7g02725 Pkinase 1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02725 K08857 - gmx:100810347 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02725 7 31090971 31097886 Phac7g02725 7 31090971 31097886 ECH
Phac1g02196 1 31693921 31700654 Phac7g02725 7 31090971 31097886 PCT