Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02700 ATGAGAGAGGGGCTGAGATCGCGGGCGCGATTGGGGACGGTTTCTGGAGGCGAAGGAGTTGTTCACAAGAAAAAGGTTGTTGTGAAGAGCGAGGATGTTGACTTGGATGGCGAGGGTTTGGAGGTGCAGAACTCAACGATTGAGAAGAAGGGTGAAGCTGCACGTGATGTTAAAGAAGAATGTGGCTTTGATTTGAATGTGAGTGCGAGTGGAGAGGTTGACTTGGAAGAGAATGGGAGTGGTAGGGGTTGTTTTAGTGGTGTGGGTGGTACTGTAGTAGCTGAGGTAGATAGGAAGACAAAGAAGGAGCAAGGTTCAAATAATGAAGTACGGGTTGGGGGTCGCGTGTTGCGCTCAAGGTCTAATGGGGGGAAGGATAAAAGAGTGTACTATGGAGAGAATGAAGATGTTGTTTCTGAGAGTGATAGAGAATGCAGTGGGTTTGAGAGGGGGAAAGTTAAGGCGGAATGTGAAGAAGCTGATGAATTTTTGGCTGACAGTTCTGAGAATGAAAAGGCTATGGTGAAGAAGGAAGAGAATGGCACGAGGAATTTGAAACGGAAGCGTGGGAGGCCTCCCAAAATAAATTTGAAAGTGGAAGATCAATTAGTTGATCATCAATTAGTGGATCATCAATTAGTTGATCAGTTGCCACGTAAGCGTGGAAGACCCCCTCTGGCCAGCAAACAAAACCATGTGGATGTGAATAATAGAAAAGAAAAGGCTGCCCTTCGAAAAGATAAAAAGGGTTTAACTATGAGACATGATGCTAATGTGAATGCAATGGATGATACAAATTTAAGGAAATCTGCTGGGGATGAGCTAGAAAAGAAGGAAGTCACTTCTGGCAAGAAGTCTAAATTTAGTAAGGCTTCGGAAACTGACAACAATTTGGTGGCCTCACCATTAAGATCAAATACTGAGAATGCACTTACTGAAAAAAGTGGAAAAAATAGAGTAAAGCAGTTAGTGAGGGAGCAAATAAAGGAAATTCTCTCAGCTGCAGGCTGGACAGTTGACTATAGACCTAGGAATGGTAGACAGTACCATGATGCAGTGTATGTTAGTCTGGACGGACACACGCACTGGTCAATCACCTTGGCCTACAAAAGGCTTAAAGAGTATTATGAAGCTGGTAATGGTGAAGGTAAGGCATATGGGCCAGGCTTCAAATTTACACCAATACCAGCACAGGATTTCAAAATACTCACAAAGGTAATTAACAAGCAAAGAAAAATGAAAGATAAATCTGTAGAGAAAGGGGGAAAGGGTGGAAATAAAGTTGATGGAGTCAGTGGTAACAAAAATAAAGAAAAGTCAGTGAAGAGGAAAATGAAAAGGAAGCGGTCACTTGGAGACACAGATGCTATATCACCTAACAGGATGCCAGTTCGTGTGAGGGATCATAAGCGGCACAAAACACAAAATAAGCTGCGAAGTGGTCCATTGGTTCGTAATGCTGAGGAGATAGATTCAGAAACTGAGGGATATGTACTGTACAGTGGAAAAAGAACTTTGCTTGCTTGGATGATTGATTTGGGCACAGTCCTTCTAAATGGGAAGGTTCATTATAAGGCACCTGAAGATAAAAGTGAAGTACTGGATGGTAAGATCACAGGAGATGGCATTCATTGTGGCTGCTGTGATAAAATCATTACAATTTCAGAATTTGAAGTTCACGCAGGAAGAAAATTCGCTGATCCACTTCAAAATATATATGTGGAGGAAGGAAAGTCTCTTTTACAGTGTTTGCTAGATTCGTGGAATAAGCAAGATGAATCTGAACGTCATGGTTTTCATTTTGTTGATGTTGCGGGTGAAGATCCAAATGATGATACTTGTGGGGTCTGTGGAGATGGTGGAGACCTGATATGTTGTGATGGTTGCCCATCAACATTCCATCAAGACTGCTTGGATATAGAAAAGTTTCCATCTGGTGATTGGCACTGCATTTATTGCTGTTGCAAATTTTGTGGGTCAGTTAATGGATGTTCAGAACAAAAGGATGGTGATAATGATCTTACTGTGTCAAAATTACTCACGTGCCGACTATGTGAGCAAAAATGTCACAGATTCTGCATTGAGGCAAATGATTGCAACACTATTGATTCCAGCGATGTGTTCTTTTGTGGAAACAGATGTCAAGAGTTATCTGAGAGACTTGAAATGCTCCTAGGGGTTAAACATGAAATTGAAGATGGATATTCATGGACTTTTATTCGGCGGTCAGATGTTGGGATTGATGCTTCTGAGTTAAAACCTCAGATGGTTGAATGTAATTCTAAGCTTGCTGTTGCATTATCGATAATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGGTCAATCTGATCCACAGTATTCTCTATAACCGTGGGTCAAATTTCAGTCGTCTGAGTTATAGTGGATTTGTTACTGCAATTCTAGAGAGAGGTGATGAGATAATTTCTGCTGCATCTATCAGGATCCATGGGAACCAACTAGCAGAGATGCCATTTATTGGAACCCGCTATATGTACAGACGACAAGGAATGTGCCGCAGGCTTCTAAATGCCATTGAATTGGGACTCGGCTCTTTAAATGTTGAATTATTGGTGATACCAGCTATCTCAGAACTCAGAGAAACTTGGACTTCCATTTTTGGGTTTGAGCCACTTGAATCAACAATCAAGCAAACAATACATAATATGAATCTATTGGTATTTCCTCATGTAGATATGTTACAGAAGAAGATATCAGAACATGAATTGGCTGGTCATAAACCGATTCCTTCAGACGCTTTCAATCTTCAAACCAATCAAATAGTAAACAATTGCAATGGAGCGGGCTCATCTGGATCTGATTTGATCAATCATATCGAGATTCCTCCCCGCCCTAATACATGCCAGATAAAGGATGAAACCGTATCGACTGAATCTGATTGTCATCTTCCTGAGGGTTCATTGAATAATGTACCTGACATTGCTAGCAACATTAATGATTATAGACAATCTTCAAAAGGTGACACATATCAAGTTGTTCGTCAGACAGGTGATGAGAATCCGGTGATGGACAACAGTATTAAAAATGCCTGTGAATATGTGACTGATACTTGTTGCATCGCTGGAGATAGCCAGTTGAACAATTGCGCGGTTCCTTATGAGGAAAGACTGTGTCCCACATCTCGTATTAACACTGAGGCTACAGAAGGACAGTCTGTTAGTGTTTCGTTGGAGGTTACTGAAAACTTTCCAAATCGTGTCGAAGTATCAAATGAAGTTATATCAAATAACAAAAGTGTCGAAGACTCGGAACCCTGTGGTGCAGAAAGTATTACAAGAGATTCAAAAGTTTGTGCTGACTCTATTGACCAGGATTCATGTATAATTTCCGACAGTTGTGAACTGAGAAGCGACACTGACTGTGGTCAACCGAACTTCATGGGAACAGAAGAAAAACATAGTGAATTTATTAGTGTTTGTGGTTCTCATTCTAGAGCTAATGGTGATTGTGCCTCTGGTGAAGGTGCTTCCGCCACTAACGTGTTATTGCACCGTACATCACAGGACATGACCAATGACAAGCCTTGGGTGAAAGGGTCTTCAGAGGTATCTGAGCCTGATTTGCAGGTGGATGAAACTGAACGGAACAGTGGTCCCTCCCCGTGGAGCCCTAACACTGCTTCTGGTTGTGCATCTACAGGCAGTGCTTCTCGTGGTACTGAGGGGATATTTTTGTCAAACCAAGCCAGTTGA 3741 0.4173 MREGLRSRARLGTVSGGEGVVHKKKVVVKSEDVDLDGEGLEVQNSTIEKKGEAARDVKEECGFDLNVSASGEVDLEENGSGRGCFSGVGGTVVAEVDRKTKKEQGSNNEVRVGGRVLRSRSNGGKDKRVYYGENEDVVSESDRECSGFERGKVKAECEEADEFLADSSENEKAMVKKEENGTRNLKRKRGRPPKINLKVEDQLVDHQLVDHQLVDQLPRKRGRPPLASKQNHVDVNNRKEKAALRKDKKGLTMRHDANVNAMDDTNLRKSAGDELEKKEVTSGKKSKFSKASETDNNLVASPLRSNTENALTEKSGKNRVKQLVREQIKEILSAAGWTVDYRPRNGRQYHDAVYVSLDGHTHWSITLAYKRLKEYYEAGNGEGKAYGPGFKFTPIPAQDFKILTKVINKQRKMKDKSVEKGGKGGNKVDGVSGNKNKEKSVKRKMKRKRSLGDTDAISPNRMPVRVRDHKRHKTQNKLRSGPLVRNAEEIDSETEGYVLYSGKRTLLAWMIDLGTVLLNGKVHYKAPEDKSEVLDGKITGDGIHCGCCDKIITISEFEVHAGRKFADPLQNIYVEEGKSLLQCLLDSWNKQDESERHGFHFVDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHQDCLDIEKFPSGDWHCIYCCCKFCGSVNGCSEQKDGDNDLTVSKLLTCRLCEQKCHRFCIEANDCNTIDSSDVFFCGNRCQELSERLEMLLGVKHEIEDGYSWTFIRRSDVGIDASELKPQMVECNSKLAVALSIMDECFMPYIDHRSGVNLIHSILYNRGSNFSRLSYSGFVTAILERGDEIISAASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLLNAIELGLGSLNVELLVIPAISELRETWTSIFGFEPLESTIKQTIHNMNLLVFPHVDMLQKKISEHELAGHKPIPSDAFNLQTNQIVNNCNGAGSSGSDLINHIEIPPRPNTCQIKDETVSTESDCHLPEGSLNNVPDIASNINDYRQSSKGDTYQVVRQTGDENPVMDNSIKNACEYVTDTCCIAGDSQLNNCAVPYEERLCPTSRINTEATEGQSVSVSLEVTENFPNRVEVSNEVISNNKSVEDSEPCGAESITRDSKVCADSIDQDSCIISDSCELRSDTDCGQPNFMGTEEKHSEFISVCGSHSRANGDCASGEGASATNVLLHRTSQDMTNDKPWVKGSSEVSEPDLQVDETERNSGPSPWSPNTASGCASTGSASRGTEGIFLSNQAS* 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02700 1246 MobiDBLite consensus disorder prediction 267 291 - -
Phac7g02700 1246 MobiDBLite consensus disorder prediction 1209 1246 - -
Phac7g02700 1246 SMART PHD_3 613 654 IPR001965 -
Phac7g02700 1246 SMART PHD_3 655 715 IPR001965 -
Phac7g02700 1246 MobiDBLite consensus disorder prediction 1182 1246 - -
Phac7g02700 1246 SMART AT_hook_2 218 230 IPR017956 GO:0003677
Phac7g02700 1246 SMART AT_hook_2 186 198 IPR017956 GO:0003677
Phac7g02700 1246 MobiDBLite consensus disorder prediction 265 296 - -
Phac7g02700 1246 MobiDBLite consensus disorder prediction 218 247 - -
Phac7g02700 1246 MobiDBLite consensus disorder prediction 412 460 - -
Phac7g02700 1246 ProSiteProfiles Zinc finger PHD-type profile. 611 656 IPR019787 -
Phac7g02700 1246 MobiDBLite consensus disorder prediction 233 247 - -
Phac7g02700 1246 MobiDBLite consensus disorder prediction 168 186 - -
Phac7g02700 1246 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 603 669 IPR013083 -
Phac7g02700 1246 PANTHER PHD FINGER PROTEIN 12 288 1108 IPR042163 GO:0003714|GO:0045892
Phac7g02700 1246 Pfam Tify domain binding domain 536 585 IPR032308 -
Phac7g02700 1246 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 747 914 IPR000182 GO:0016747
Phac7g02700 1246 MobiDBLite consensus disorder prediction 168 194 - -
Phac7g02700 1246 CDD PHD1_AIRE 614 653 - -
Phac7g02700 1246 SUPERFAMILY FYVE/PHD zinc finger 603 654 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02700 Phac-Chr7 30814236 30822692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02700 120 920 PHD Transcription Factor Family AT5G36670 39.232 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02700 - - gmx:100784172 1590.86