Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02670 ATGGAAGAGCAAAGTAATGAAGAGAGTCCTGTGCAACTAACATCCTGTGACACTGGGGGAACAACCAATGATGTCTCTCATTCAGCTGAGGATCATCTCATTCCCAACCAAAAATTTTTCATTGCAGCATCATCTGGAAGAAATGAGAGCCACTGGACTTGCTTTCCAAAACCATCTCATAACTATGTTAAGTATCTTTCAGAATCCTCAACTTATCTGCCAAACACTTCCACTGATTACATGATGGGAGGTAGTTATCTACCGGTTGGCAACATCAATGATGGCGACGTGGTTAATGGACCAGACAGAAATTTCTTTTACAATGATCCAGAAAAAGTCTGTGCCTTTAAGCCTATTGGTTCTTCAAGTAATGACCTTGACATTAAGAAGGTGGGGTTTTGGAGAGCTGATGAAGGAGAGGAAGTGATTAAAGTCGAAACTGAAAGTAGTCAAAATTTTCTTTATGCTGAGAGTCATGCTTTATGGACAGCAGATTCTCTTGGAGATAAGCATAATGCTTTGCATGATCCAATGGTAATGGCTGGTGCACCTGCTTTACTTCCCAAATCAGGATGCAGCTCCTCAAAAGAGAAAGCACGTGTCACTGACCGTAAACGCAGGCAACGTATCGCTGATAACCTGAAAGCCTTACACGAATTGCTTCCAAATCCAGCAGAGGGAAGTCAAGCGTACATACTGGACGATATTATTGACTACGTCAAATATTTACAGCTTCAAATAAAGGAACAAAGTGGAAGTAGATTGCAAGAGGAATCAACTGCTATACCACTAGTTTTTCATGAGGGTTACGGTCATTATATTGACCAACAGATGCTGAATGAACCCCTCGAAGAGATAATGGGGAAACTACTTGAAGAACATTCTGCAGCAGCTGGTCAGCTACTGGAGAGTAAGGGTCTTTTCCTGCTGCCTATGGCTTTGGTTGATGATTTGAGTGAGGCTATGCAAATGTTTGGCGAGAGTGCCCTGGTCTGA 996 0.4227 MEEQSNEESPVQLTSCDTGGTTNDVSHSAEDHLIPNQKFFIAASSGRNESHWTCFPKPSHNYVKYLSESSTYLPNTSTDYMMGGSYLPVGNINDGDVVNGPDRNFFYNDPEKVCAFKPIGSSSNDLDIKKVGFWRADEGEEVIKVETESSQNFLYAESHALWTADSLGDKHNALHDPMVMAGAPALLPKSGCSSSKEKARVTDRKRRQRIADNLKALHELLPNPAEGSQAYILDDIIDYVKYLQLQIKEQSGSRLQEESTAIPLVFHEGYGHYIDQQMLNEPLEEIMGKLLEEHSAAAGQLLESKGLFLLPMALVDDLSEAMQMFGESALV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02670 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 254 IPR036638 GO:0046983
Phac7g02670 331 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 121 314 - -
Phac7g02670 331 SMART finulus 200 249 IPR011598 GO:0046983
Phac7g02670 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 194 243 IPR011598 GO:0046983
Phac7g02670 331 CDD bHLH_AtbHLH_like 202 249 IPR045239 -
Phac7g02670 331 Gene3D - 193 262 IPR036638 GO:0046983
Phac7g02670 331 MobiDBLite consensus disorder prediction 1 29 - -
Phac7g02670 331 MobiDBLite consensus disorder prediction 7 29 - -
Phac7g02670 331 Pfam Helix-loop-helix DNA-binding domain 196 244 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02670 Phac-Chr7 30477142 30479325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02670 201 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 39.837 3.72e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g02670 HLH 5.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02670 - - gmx:100788949 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02670 7 30477142 30479325 Phac7g02670 7 30477142 30479325 ECH