Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02649 ATGGTAAAACTCGAAACTAATCTCGATCATTTGTGTAAGATTAGATGGTCAAAAATCCAAATTAGCTCTTTTCACTCGTTTTATTCGCTTCGGGAGTATGTGGGTTACAAGCGGTTTTTTAAGAGAACAGCACTAGAGACATCAGATTATCTTAAAGACGATTGCCTTAGTGTTAATTGTAGTGTTGGTGTTGTGAAATCACACACAGAGGGCCCTAAAATATATAAAATTCCAATTATGCCTTCTAACATTGGTCAACAATTTGGGAAGCTATTAGAAAGTGGGAAAGACAGTGATGTAAGTTTTGAAGTGAATGGAGAAATTTTTGCTGCTCATAAATTGGTACTAGCTGCTCGCTCACCAGTTTTCAGGGCCCAACTTTTTGGTCCTATGAAAGATCATAATACTCGTTGTATAAAAGTTGAAGACATGGAGGCCCCAGTTTTCAAGGCATTGCTTCATGTTATATATTGGGACTCACTACCTGACATGTTAGAGCTTACTGGGTTGAGCTCAAAAGGGGCCACTACCTTGATGGCTCAGCATCTGCTAGCAGCAGCTGATCGGTATGGCTTAGAGAGAGTTAGGCTGATGTGTGAAACAAGTCTCTGTGAAGATGTTGCAATAAACACTGTTGCTACGACTCTGGCCTTGGCAGAGCAACACCATTGTTTCCAACTGAAAGCAGTCTGTCTTAAATTCGTTGCACAGCCTGAAAATCTCAGAGCTGTGATGCAAACCGATGGTTTTGAGTACTTGAAAGAAAGTTGCCCATCTGTTTTGACTGAGCTTTTAGAGTATGTGGCTAGATTTACCGAGCATTCAGACTACTTGTGCAAGCATAGGAATGAAGCAATACTTGATGGCAGCGACATAAATGGAAGGAGGGTGAAGCAAAGGCTATAG 906 0.4095 MVKLETNLDHLCKIRWSKIQISSFHSFYSLREYVGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYKIPIMPSNIGQQFGKLLESGKDSDVSFEVNGEIFAAHKLVLAARSPVFRAQLFGPMKDHNTRCIKVEDMEAPVFKALLHVIYWDSLPDMLELTGLSSKGATTLMAQHLLAAADRYGLERVRLMCETSLCEDVAINTVATTLALAEQHHCFQLKAVCLKFVAQPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDYLCKHRNEAILDGSDINGRRVKQRL* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02649 301 Gene3D - 207 283 - -
Phac7g02649 301 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 26 265 IPR045005 GO:0016567
Phac7g02649 301 Gene3D Potassium Channel Kv1.1; Chain A 74 202 IPR011333 -
Phac7g02649 301 FunFam BTB-POZ and math domain 1 74 201 - -
Phac7g02649 301 FunFam BTB-POZ and math domain 1 207 284 - -
Phac7g02649 301 CDD BTB_POZ_BPM_plant 84 204 - -
Phac7g02649 301 CDD BACK_AtBPM-like 204 267 IPR034090 -
Phac7g02649 301 ProSiteProfiles BTB domain profile. 98 157 IPR000210 GO:0005515
Phac7g02649 301 SUPERFAMILY POZ domain 75 205 IPR011333 -
Phac7g02649 301 SMART BTB_4 98 207 IPR000210 GO:0005515
Phac7g02649 301 CDD MATH 17 62 IPR002083 GO:0005515
Phac7g02649 301 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 6 67 IPR008974 GO:0005515
Phac7g02649 301 SUPERFAMILY TRAF domain-like 21 69 - -
Phac7g02649 301 Pfam BTB/POZ domain 89 205 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02649 Phac-Chr7 30403342 30407823 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Phac7g02649 BTB 4.2e-24 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02649 K10523 - gmx:100811065 512.686