Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02644 ATGAAGATGATTCCTTGGGGTGGCCTCAGTTGCTGTTTGAGTGCTGCTGCTCTTTATCTTCTCGGCAGAAGCAGTGGCAGGGATGCGGAAATTCTTAAATCCGTTACCAGGGTCAATCAGTTGAAGGAACTGGCTCAACTGTTAGATGCCGAAATATTACCCTTGATTGTTACAATTTCGGGAAGAGTTGGCTCTGAAACCCCAATTAGCTGCGACTTCAGTGGTTTAAGAGGTGTAATAGTTGAAGAAACAGCAGAGCAACATTTTCTTAAACACAATGATGCTGGTTCCTGGATACAAGATTCTGCTTTGATGCTATCAATGAGTAAAGAGGTTCCTTGGTATCTGGATGATGGGAGTGATCGTGTGCATGTGGTTGGAGCTCGGGGTGCCACTGGTTTTGCATTACCTGTTGGAAGTGAGGCATTTGAAGAGTCAGGTCGGTCACTTGTACGTGGAACATTGGATTATCTCCAAGGTCTCAAGATGCTTGGAGTCAAGAGAATTGAACGGGTACTTCCTGTTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGATGATGTTGGGACAATTCGAATTCAGCGACCCCACAAAGGACCATTTTATGTATCTCCCAAAACAATTGATCAACTAATTGCAAATCTAGGGAAATGGGCAAGGTGGTATAAGTATGCCTCTATGGGCTTGACAGTGTTTGGTGCTTATCTGATAGCTAAGCATGCTATTCGGTTCATATTGGAAAGACGGCGCCGCAGCGAACTACAAAGAAGGGTTCTTGCTGCTGCTGCTGCGAAGAAGTCAGGACCAAATAATGATGGTAAATTTATAGCTCAATTATATTTATGTTTGAGTCGCCTATTTCAATATTTACTATAA 882 0.4342 MKMIPWGGLSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDAEILPLIVTISGRVGSETPISCDFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGSDRVHVVGARGATGFALPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLTVVGEAAKDDVGTIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIAKHAIRFILERRRRSELQRRVLAAAAAKKSGPNNDGKFIAQLYLCLSRLFQYLL* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02644 293 Pfam E3 Ubiquitin ligase 87 235 IPR022170 GO:0004842|GO:0006996|GO:0016567
Phac7g02644 293 PANTHER - 2 275 IPR044231 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02644 Phac-Chr7 30381147 30384682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02644 3 267 C3H Transcription Factor Family AT1G63900 78.652 2.15e-155 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02644 K15688 - gmx:100800734 498.434