Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02643 ATGAAGATGATTCCTTGGGGTGGCCTCAGTTGCTGTTTGAGTGCTGCTGCTCTTTATCTTCTCGGCAGAAGCAGTGGCAGGGATGCGGAAATTCTTAAATCCGTTACCAGGGTCAATCAGTTGAAGGAACTGGCTCAACTGTTAGATGCCGAAATATTACCCTTGATTGTTACAATTTCGGGAAGAGTTGGCTCTGAAACCCCAATTAGCTGCGACTTCAGTGGTTTAAGAGGTGTAATAGTTGAAGAAACAGCAGAGCAACATTTTCTTAAACACAATGATGCTGGTTCCTGGATACAAGATTCTGCTTTGATGCTATCAATGAGTAAAGAGGTTCCTTGGTATCTGGATGATGGGAGTGATCGTGTGCATGTGGTTGGAGCTCGGGGTGCCACTGGTTTTGCATTACCTGTTGGAAGTGAGGCATTTGAAGAGTCAGGTCGGTCACTTGTACGTGGAACATTGGATTATCTCCAAGGTCTCAAGATGCTTGGAGTCAAGAGAATTGAACGGGTACTTCCTGTTGGAACTTCCTTGACTGTTGTTGGTGAGGCTGCTAAAGATGATGTTGGGACAATTCGAATTCAGCGACCCCACAAAGGACCATTTTATGTATCTCCCAAAACAATTGATCAACTAATTGCAAATCTAGGGAAATGGGCAAGGTGGTATAAGTATGCCTCTATGGGCTTGACAGTGTTTGGTGCTTATCTGATAGCTAAGCATGCTATTCGGTTCATATTGGAAAGACGGCGCCGCAGCGAACTACAAAGAAGGGTTCTTGCTGCTGCTGCTGCGAAGAAGTCAGGACCAAATAATGATGTTGAAAAGGCCGACAGCTTATCAGATGTTGCTAAAAGGGATCACTTAATGCCGGATTTGTGCGTAATATGCCTTGAACAGGAATATAATGCTGTTTTTGTTCCGTGTGGACATATGTGTTGTTGTACAGCTTGTTCTTCACACTTAACCAATTGTCCTCTTTGCCGGCGGCAGATAGAGAAGGTTGTCAAGACTTTCCGTCATTGA 1029 0.4441 MKMIPWGGLSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDAEILPLIVTISGRVGSETPISCDFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGSDRVHVVGARGATGFALPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLTVVGEAAKDDVGTIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIAKHAIRFILERRRRSELQRRVLAAAAAKKSGPNNDVEKADSLSDVAKRDHLMPDLCVICLEQEYNAVFVPCGHMCCCTACSSHLTNCPLCRRQIEKVVKTFRH* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02643 342 CDD RING-HC_LRSAM1 295 338 - -
Phac7g02643 342 Pfam E3 Ubiquitin ligase 87 235 IPR022170 GO:0004842|GO:0006996|GO:0016567
Phac7g02643 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 341 IPR013083 -
Phac7g02643 342 SUPERFAMILY RING/U-box 294 336 - -
Phac7g02643 342 FunFam E3 ubiquitin-protein ligase SP1 283 341 - -
Phac7g02643 342 ProSiteProfiles Zinc finger RING-type profile. 295 330 IPR001841 -
Phac7g02643 342 PANTHER - 2 309 IPR044231 GO:0004842|GO:0016567
Phac7g02643 342 Pfam Zinc finger, C3HC4 type (RING finger) 293 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02643 Phac-Chr7 30380090 30384682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02643 3 267 C3H Transcription Factor Family AT1G63900 78.652 1.48e-154 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02643 K15688 - gmx:100803252 636.721